RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TMEM139Q8IV31 216 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 RHOT1Q8IXI2 618 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 CBARPQ8N350 705 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-205ENST00000468338 BBS5Q8N3I7 341 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-205ENST00000468338 SETD7Q8WTS6 366 aaKnown RBP11.22□□□□□ -0.61
COL4A6-205ENST00000468338 MYOCQ99972 504 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 NOD2Q9HC29 1040 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 CHD8Q9HCK8 2581 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 SALL4Q9UJQ4 1053 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 TFR2Q9UP52 801 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
COL4A6-205ENST00000468338 PPIL1Q9Y3C6 166 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 ALG6Q9Y672 507 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 SPTY2D1-AS1A0A0U1RR47 76 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 TTC24A2A3L6 582 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-205ENST00000468338 LRRD1A4D1F6 860 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 BTNL10A8MVZ5 291 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 TOR1BO14657 336 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 FPGTO14772 594 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 MATN3O15232 486 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 PSTPIP1O43586 416 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 FZD6O60353 706 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 TRIM16O95361 564 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 RABIFP47224 123 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 YPEL5P62699 121 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 IL9RQ01113 521 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 PPIDQ08752 370 aaKnown RBP11.21□□□□□ -0.61
COL4A6-205ENST00000468338 FZD2Q14332 565 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 TSNAXIP1Q2TAA8 658 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 TPRG1LQ5T0D9 272 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 TIGD7Q6NT04 549 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-205ENST00000468338 C11orf63Q6NUN7 778 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 LIPIQ6XZB0 460 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 RAB44Q7Z6P3 723 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-205ENST00000468338 SLCO6A1Q86UG4 719 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 GATAD2AQ86YP4 633 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 SLC25A45Q8N413 288 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 CXorf40AQ8TE69 158 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 NSMCE1Q8WV22 266 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 ADAMTS14Q8WXS8 1223 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 OLFM3Q96PB7 478 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 DDX56Q9NY93 547 aaKnown RBP11.21□□□□□ -0.61
COL4A6-205ENST00000468338 IMPACTQ9P2X3 320 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 ANGPTL2Q9UKU9 493 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 HYOU1Q9Y4L1 999 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 PCDHGC4Q9Y5F7 938 aa11.21□□□□□ -0.61
COL4A6-205ENST00000468338 PTPRBP23467 1997 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 PJA2O43164 708 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 TNFSF14O43557 240 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 PGLSO95336 258 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 MAP3K6O95382 1288 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 ITGAVP06756 1048 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 FTH1P19P0C7X4 201 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 GIMD1P0DJR0 217 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 C6P13671 934 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 CCNB1P14635 433 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 GM2AP17900 193 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 XPAP23025 273 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 CES1P23141 567 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 IGFALSP35858 605 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 CDKN2BP42772 138 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 NOP2P46087 812 aaKnown RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 LIG3P49916 1009 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 MAXP61244 160 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 TRAF2Q12933 501 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 CLN3Q13286 438 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 WSCD2Q2TBF2 565 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 INAVAQ3KP66 663 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 CFAP58Q5T655 872 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 ERAP2Q6P179 960 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 MFSD7Q6UXD7 560 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 DPPA4Q7L190 304 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 ARRDC2Q8TBH0 407 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 PIH1D2Q8WWB5 315 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 MCCC1Q96RQ3 725 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 IL12RB2Q99665 862 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 WRAP53Q9BUR4 548 aaKnown RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 C1QTNF7Q9BXJ2 289 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 POLR1EQ9GZS1 481 aaKnown RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 LACRTQ9GZZ8 138 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 GOLPH3Q9H4A6 298 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 NT5MQ9NPB1 228 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 LUC7LQ9NQ29 371 aaKnown RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 MBNL1Q9NR56 388 aaKnown RBP11.2□□□□□ -0.62
COL4A6-205ENST00000468338 PHTF1Q9UMS5 762 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 SPEGQ15772 3267 aa11.2□□□□□ -0.62
COL4A6-205ENST00000468338 MAP1BP46821 2468 aaKnown RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 PLXNB3Q9ULL4 1909 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 ASXL3Q9C0F0 2248 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 APOL1O14791 398 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 SPOPO43791 374 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 PIAS2O75928 621 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 TOP3BO95985 862 aaKnown RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 CSF2P04141 144 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 KRT1P04264 644 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 PRKCGP05129 697 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 ATXN1LP0C7T5 689 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms