RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 WSCD2Q2TBF2 565 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 UAP1L1Q3KQV9 507 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 LAYNQ6UX15 382 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 SLC13A5Q86YT5 568 aaPredicted RBP20.08■□□□□ 0.81
NPHP4-206ENST00000468253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.08■□□□□ 0.81
NPHP4-206ENST00000468253 SLC35B2Q8TB61 432 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 COQ10AQ96MF6 247 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 TRIB3Q96RU7 358 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 SRPK1Q96SB4 655 aaKnown RBP20.08■□□□□ 0.81
NPHP4-206ENST00000468253 TM7SF3Q9NS93 570 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 KLHL8Q9P2G9 620 aaPredicted RBP20.08■□□□□ 0.81
NPHP4-206ENST00000468253 FAM153AQ9UHL3 310 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 CA5BQ9Y2D0 317 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 C5orf60A6NFR6 353 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 H0Y8X5 98 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 KCNK3O14649 394 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 RECQL5O94762 991 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 HOXC4P09017 264 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 CD59P13987 128 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 STIP1P31948 543 aaKnown RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 ARRB1P49407 418 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 ARHGEF7Q14155 803 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 QPCTQ16769 361 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 ITPRIPL1Q6GPH6 555 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 CCDC70Q6NSX1 233 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 CRTC1Q6UUV9 634 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 PIP4P1Q86T03 277 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 OR13H1Q8NG92 308 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 OR2I1PQ8NGU4 316 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 PPP1R2P1Q96PQ5 205 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 MLPHQ9BV36 600 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 IL21RQ9HBE5 538 aa20.07■□□□□ 0.8
NPHP4-206ENST00000468253 MBNL1Q9NR56 388 aaKnown RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 FNDC3AQ9Y2H6 1198 aaKnown RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 CNOT1A5YKK6 2376 aaKnown RBP20.07■□□□□ 0.8
NPHP4-206ENST00000468253 PCDH15Q96QU1 1955 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 SPTY2D1-AS1A0A0U1RR47 76 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 LOC285095A0A1B0GVY8 99 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 MSNP26038 577 aaKnown RBP20.06■□□□□ 0.8
NPHP4-206ENST00000468253 SEMG2Q02383 582 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 CCDC173Q0VFZ6 552 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 PTK2BQ14289 1009 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 CNGA3Q16281 694 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 SPATA22Q8NHS9 363 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 MAIP1Q8WWC4 291 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 MYOCQ99972 504 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 ZKSCAN5Q9Y2L8 839 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 COQ6Q9Y2Z9 468 aa20.06■□□□□ 0.8
NPHP4-206ENST00000468253 TCRBV7S2A1N4TA0A589 114 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 RGSL1A5PLK6 1076 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 CAPN8A6NHC0 703 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 NPIPB15A6NHN6 443 aaPredicted RBP20.05■□□□□ 0.8
NPHP4-206ENST00000468253 A8MX80 341 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 KCNN4O15554 427 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 GCATO75600 419 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 ANXA9O76027 345 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 NDST3O95803 873 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 MT-CYBP00156 380 aaPredicted RBP20.05■□□□□ 0.8
NPHP4-206ENST00000468253 CTPS1P17812 591 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 GM2AP17900 193 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 NFKB1P19838 968 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 LHCGRP22888 699 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 TRIM23P36406 574 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 CCT8P50990 548 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 PTSQ03393 145 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 MPP3Q13368 585 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 MTM1Q13496 603 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 ACOX1Q15067 660 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 CDKN3Q16667 212 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 ANKRD20A2Q5SQ80 823 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 ANKRD20A1Q5TYW2 823 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 ANKRD20A3Q5VUR7 823 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 KDELC1Q6UW63 502 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 TECPR1Q7Z6L1 1165 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 NRSN1Q8IZ57 195 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 C10orf88Q9H8K7 445 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 MAGEE1Q9HCI5 957 aa20.05■□□□□ 0.8
NPHP4-206ENST00000468253 R3HDM2Q9Y2K5 976 aaKnown RBP20.05■□□□□ 0.8
NPHP4-206ENST00000468253 SHROOM3Q8TF72 1996 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 KIF5CO60282 957 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 ALPIP09923 528 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 CEACAM1P13688 526 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 TEAD1P28347 426 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 IGFALSP35858 605 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 WNT3AP56704 352 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 DPTQ07507 201 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 SHBQ15464 509 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 PTAR1Q7Z6K3 402 aaPredicted RBP20.04■□□□□ 0.8
NPHP4-206ENST00000468253 LPCAT1Q8NF37 534 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 SPATA13Q96N96 652 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 GBA3Q9H227 469 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 SLC32A1Q9H598 525 aa20.04■□□□□ 0.8
NPHP4-206ENST00000468253 AAR2Q9Y312 384 aaKnown RBP20.04■□□□□ 0.8
NPHP4-206ENST00000468253 ASCC3Q8N3C0 2202 aaKnown RBP20.04■□□□□ 0.8
NPHP4-206ENST00000468253 DCDC2BA2VCK2 349 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 PMPCBO75439 489 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 STC1P52823 247 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 GEMP55040 296 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 FZD2Q14332 565 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 PRPSAP1Q14558 356 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms