RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ZSCAN23Q3MJ62 389 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 ANO6Q4KMQ2 910 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 RAB11FIP2Q7L804 512 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 ZNF605Q86T29 641 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 PELI3Q8N2H9 469 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 FBXO39Q8N4B4 442 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 FAM46DQ8NEK8 389 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 GPR156Q8NFN8 814 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 OR6C4Q8NGE1 309 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 FNIP1Q8TF40 1166 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 STRADBQ9C0K7 418 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 LRRN3Q9H3W5 708 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.14■□□□□ 0.97
COL9A3-207ENST00000467819 MYO1AQ9UBC5 1043 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 SEPT3Q9UH03 358 aa21.14■□□□□ 0.97
COL9A3-207ENST00000467819 SETXQ7Z333 2677 aaKnown RBP21.13■□□□□ 0.97
COL9A3-207ENST00000467819 B4DGG1 531 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 AGRPO00253 132 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 TRAFD1O14545 582 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-207ENST00000467819 HGFP14210 728 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 KELP23276 732 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 RENBPP51606 427 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 AP1S1P61966 158 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 SLC10A7Q0GE19 358 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 DPYSQ14117 519 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 ZNF235Q14590 738 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 TMCO4Q5TGY1 634 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 JAMLQ86YT9 394 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 CCNJLQ8IV13 435 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 PSTKQ8IV42 348 aaKnown RBP21.13■□□□□ 0.97
COL9A3-207ENST00000467819 SFTPA2Q8IWL1 248 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 PDCD6IPQ8WUM4 868 aaKnown RBP21.13■□□□□ 0.97
COL9A3-207ENST00000467819 PSKH2Q96QS6 385 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 LGR4Q9BXB1 951 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 NAT10Q9H0A0 1025 aaKnown RBP21.13■□□□□ 0.97
COL9A3-207ENST00000467819 TMEM168Q9H0V1 697 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 WDR26Q9H7D7 661 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 CYP4F12Q9HCS2 524 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 B4GALT6Q9UBX8 382 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 SSUH2Q9Y2M2 353 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 SCINQ9Y6U3 715 aa21.13■□□□□ 0.97
COL9A3-207ENST00000467819 DDX3XO00571 662 aaKnown RBP eCLIP21.12■□□□□ 0.97
COL9A3-207ENST00000467819 MBD3O95983 291 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 PLA2G2AP14555 144 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 UGT1A5P35504 534 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 HCAR3P49019 387 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 KLHL30Q0D2K2 578 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 LY6DQ14210 128 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 SMTNL2Q2TAL5 461 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 FILIP1LQ4L180 1135 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 KIAA1614Q5VZ46 1190 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 CCDC81Q6ZN84 652 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 SUDS3Q9H7L9 328 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-207ENST00000467819 ZWILCHQ9H900 591 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 AIPL1Q9NZN9 384 aa21.12■□□□□ 0.97
COL9A3-207ENST00000467819 ATXN7L1Q9ULK2 861 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-207ENST00000467819 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-207ENST00000467819 H3BRJ5 948 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 TMX2-CTNND1H3BSU7 103 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 K7ENP7 123 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 NOBOXO60393 691 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 GZMAP12544 262 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 IL1R2P27930 398 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 SLC5A2P31639 672 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 TRIM23P36406 574 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 ZNF135P52742 658 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-207ENST00000467819 EIF3IQ13347 325 aaKnown RBP21.11■□□□□ 0.97
COL9A3-207ENST00000467819 CERCAMQ5T4B2 595 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 DENND2CQ68D51 928 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 PNCKQ6P2M8 343 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 INO80CQ6PI98 192 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-207ENST00000467819 LZTR1Q8N653 840 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 CCL4L1Q8NHW4 92 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 SNRNP27Q8WVK2 155 aaKnown RBP21.11■□□□□ 0.97
COL9A3-207ENST00000467819 HSPH1Q92598 858 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 TTC9Q92623 222 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 NUS1Q96E22 293 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 WBP1Q96G27 269 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 TMEM74Q96NL1 305 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 ZNF599Q96NL3 588 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 SEMA4CQ9C0C4 833 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 DPEP2Q9H4A9 486 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 ETNK2Q9NVF9 386 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 PISDQ9UG56 409 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 PCDHGC4Q9Y5F7 938 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 RNF215Q9Y6U7 377 aa21.11■□□□□ 0.97
COL9A3-207ENST00000467819 ZFC3H1O60293 1989 aaKnown RBP21.1■□□□□ 0.97
COL9A3-207ENST00000467819 PRSS38A1L453 326 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 TNFRSF10CO14798 259 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 CPP00450 1065 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 HOXC4P09017 264 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-207ENST00000467819 JMJD7P0C870 316 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 SKILP12757 684 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 TCF4P15884 667 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 GLB1P16278 677 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 AMPD1P23109 780 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 CCKBRP32239 447 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 ARL4AP40617 200 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 PRKCIP41743 596 aa21.1■□□□□ 0.97
COL9A3-207ENST00000467819 CNGA3Q16281 694 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms