RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 HECAQ9UBI9 543 aaPredicted RBP12.64□□□□□ -0.39
UBR4-210ENST00000466969 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 COQ6Q9Y2Z9 468 aa12.64□□□□□ -0.39
UBR4-210ENST00000466969 TRGV8A0A0C4DH27 118 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 KCNU1A8MYU2 1149 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 CCL21O00585 134 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 CLDN11O75508 207 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 HLA-DRAP01903 254 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 RHOCP08134 193 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 ADSLP30566 484 aaPredicted RBP12.63□□□□□ -0.39
UBR4-210ENST00000466969 HOXD13P35453 343 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 KIAA1024LP59773 190 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 Q0VFX4 171 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 LRRC73Q5JTD7 316 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 FBXL22Q6P050 247 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 IGFL3Q6UXB1 125 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 CLEC9AQ6UXN8 241 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 Q6ZS92 163 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 ZNF761Q86XN6 746 aaPredicted RBP12.63□□□□□ -0.39
UBR4-210ENST00000466969 ARFGAP1Q8N6T3 406 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 DCAF4L2Q8NA75 395 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 SLC4A11Q8NBS3 891 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 ARSGQ96EG1 525 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 OR6C1Q96RD1 312 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 PRMT1Q99873 361 aaKnown RBP12.63□□□□□ -0.39
UBR4-210ENST00000466969 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
UBR4-210ENST00000466969 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 AJAP1Q9UKB5 411 aaPredicted RBP12.63□□□□□ -0.39
UBR4-210ENST00000466969 FARSAQ9Y285 508 aaKnown RBP12.63□□□□□ -0.39
UBR4-210ENST00000466969 TBC1D30Q9Y2I9 924 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
UBR4-210ENST00000466969 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 PIK3R2O00459 728 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 TGFB1I1O43294 461 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 KLHL41O60662 606 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
UBR4-210ENST00000466969 SPAG6O75602 509 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 PBX1P40424 430 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 MEOX1P50221 254 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 DUS1LQ6P1R4 473 aaKnown RBP12.62□□□□□ -0.39
UBR4-210ENST00000466969 SLC30A9Q6PML9 568 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 TAC4Q86UU9 113 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 NRROSQ86YC3 692 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 TTC39CQ8N584 583 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 CCDC150Q8NCX0 1101 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 DNAJB8Q8NHS0 232 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 SGSM3Q96HU1 749 aa12.62□□□□□ -0.39
UBR4-210ENST00000466969 CARS2Q9HA77 564 aaKnown RBP12.62□□□□□ -0.39
UBR4-210ENST00000466969 APOBEC3GQ9HC16 384 aaKnown RBP12.62□□□□□ -0.39
UBR4-210ENST00000466969 CCM2LQ9NUG4 571 aaPredicted RBP12.62□□□□□ -0.39
UBR4-210ENST00000466969 A0A1W2PQJ5 194 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 PRSS38A1L453 326 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 JRKO75564 520 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 IPO13O94829 963 aaKnown RBP12.61□□□□□ -0.39
UBR4-210ENST00000466969 ADCY5O95622 1261 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 UGT2B4P06133 528 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 SETSIPP0DME0 302 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 GKP32189 559 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 RAD23BP54727 409 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 RETSATQ6NUM9 610 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 FAM199XQ6PEV8 388 aaPredicted RBP12.61□□□□□ -0.39
UBR4-210ENST00000466969 FUBP1Q96AE4 644 aaKnown RBP12.61□□□□□ -0.39
UBR4-210ENST00000466969 KLHL32Q96NJ5 620 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 TM6SF2Q9BZW4 377 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 VANGL2Q9ULK5 521 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 PLEKHM1Q9Y4G2 1056 aa12.61□□□□□ -0.39
UBR4-210ENST00000466969 KRIT1O00522 736 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 IKBKBO14920 756 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 THAP12O43422 761 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 AGAP20933 346 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 AK4P27144 223 aaPredicted RBP12.6□□□□□ -0.39
UBR4-210ENST00000466969 MAPK9P45984 424 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 RGS7P49802 495 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 SERPINH1P50454 418 aaKnown RBP12.6□□□□□ -0.39
UBR4-210ENST00000466969 VAV2P52735 878 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 CDH4P55283 916 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 DLG4P78352 724 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 PDE1BQ01064 536 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 FOLH1Q04609 750 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 SLC20A2Q08357 652 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 RRAGBQ5VZM2 374 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 MEX3BQ6ZN04 569 aaKnown RBP12.6□□□□□ -0.39
UBR4-210ENST00000466969 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 OR6K2Q8NGY2 324 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 ADAMTS17Q8TE56 1095 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 FAM149B1Q96BN6 582 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 OSBPL1AQ9BXW6 950 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 TFIP11Q9UBB9 837 aaKnown RBP12.6□□□□□ -0.39
UBR4-210ENST00000466969 ZNHIT2Q9UHR6 403 aa12.6□□□□□ -0.39
UBR4-210ENST00000466969 PDE2AO00408 941 aaPredicted RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 CLDN14O95500 239 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 HEXAP06865 529 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms