RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DUSP10Q9Y6W6 482 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 MATN4O95460 622 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 OTCP00480 354 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 ALPPL2P10696 532 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 PECAM1P16284 738 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 ZNF37AP17032 561 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 SSTR1P30872 391 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 ARF5P84085 180 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 EPS8Q12929 822 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 ZNF846Q147U1 533 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 WASHC2DQ5SRD0 308 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 DAW1Q8N136 415 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 MYO19Q96H55 970 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 ZFP14Q9HCL3 533 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 PHPT1Q9NRX4 125 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 MORF4L1Q9UBU8 362 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 LEF1Q9UJU2 399 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 AGO1Q9UL18 857 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 PSMD13Q9UNM6 376 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 HES2Q9Y543 173 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 FAM92AA1XBS5 289 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 UNCXA6NJT0 531 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 BUD23O43709 281 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 TCEA3O75764 348 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 RASGRP1O95267 797 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 FGFR3P22607 806 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 GALNT18Q6P9A2 607 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 NPNTQ6UXI9 565 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 HNRNPLLQ8WVV9 542 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 ITCHQ96J02 903 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CDRT15Q96T59 188 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 NUAK2Q9H093 628 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CNGB3Q9NQW8 809 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 ALKBH4Q9NXW9 302 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 TBC1D30Q9Y2I9 924 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 PCDHGB3Q9Y5G1 929 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 COLEC10Q9Y6Z7 277 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 KCPQ6ZWJ8 1503 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 SSNA1O43805 119 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 OR10H3O60404 316 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 VIPP01282 170 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CHRNGP07510 517 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 ZNF155Q12901 538 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 PPP1R15BQ5SWA1 713 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CLEC17AQ6ZS10 378 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 RASSF6Q6ZTQ3 369 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 APTXQ7Z2E3 356 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 CLVS1Q8IUQ0 354 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 PPCDCQ96CD2 204 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 JSRP1Q96MG2 331 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 DGCR6LQ9BY27 220 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 MMADHCQ9H3L0 296 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 MTF2Q9Y483 593 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 LOC100506127A0A0U1RQW1 187 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 H3BM21 787 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GJB6O95452 261 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 CDH5P33151 784 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 ERVK-21P61565 698 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 DLG4P78352 724 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 SMAD3P84022 425 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 TNK2Q07912 1038 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 PYDC2Q56P42 97 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 OLFML2AQ68BL7 652 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 TRIM40Q6P9F5 258 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GCNT7Q6ZNI0 430 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GPRIN3Q6ZVF9 776 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 CTU1Q7Z7A3 348 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 KATNAL2Q8IYT4 538 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 FBXL16Q8N461 479 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 SLC4A11Q8NBS3 891 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 MAGEE2Q8TD90 523 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 ZNF483Q8TF39 744 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 MARK4Q96L34 752 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 NOL6Q9H6R4 1146 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 GMPPBQ9Y5P6 360 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 LOC102724159A0A0B4J2E5 919 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 OR6C75A6NL08 312 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 PSMD11O00231 422 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 ULK1O75385 1050 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 LPOP22079 712 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 ALAS2P22557 587 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 RPL21P46778 160 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 CDK16Q00536 496 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 PWP2Q15269 919 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 MAPKAPK3Q16644 382 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 TCEAL6Q6IPX3 200 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 FAM151BQ6UXP7 276 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 IL31RAQ8NI17 732 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 TRAPPC9Q96Q05 1148 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GPER1Q99527 375 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 NDNQ99608 321 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 SEMA3CQ99985 751 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 BRINP2Q9C0B6 783 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GRIP2Q9C0E4 1043 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 CRISPLD1Q9H336 500 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 EXD2Q9NVH0 621 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GPC6Q9Y625 555 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 CYP3A7-CYP3A51PA0A087WV96 503 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 RHPN2P1A8MT19 583 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 FAM25EA8MYX2 175 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms