RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 LIPIQ6XZB0 460 aa16.33■□□□□ 0.2
BRD9-201ENST00000466684 ENOX1Q8TC92 643 aaKnown RBP16.33■□□□□ 0.2
BRD9-201ENST00000466684 USP7Q93009 1102 aa16.33■□□□□ 0.2
BRD9-201ENST00000466684 B3GNT4Q9C0J1 378 aa16.33■□□□□ 0.2
BRD9-201ENST00000466684 TMEM168Q9H0V1 697 aa16.33■□□□□ 0.2
BRD9-201ENST00000466684 WDR26Q9H7D7 661 aa16.33■□□□□ 0.2
BRD9-201ENST00000466684 MRPL40Q9NQ50 206 aaKnown RBP16.33■□□□□ 0.2
BRD9-201ENST00000466684 STARD5Q9NSY2 213 aa16.33■□□□□ 0.2
BRD9-201ENST00000466684 EIF3CLB5ME19 914 aaKnown RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 ZW10O43264 779 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 PAPOLAP51003 745 aaKnown RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 RPL7AP62424 266 aaKnown RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 SRSF6Q13247 344 aaKnown RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 MAP9Q49MG5 647 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 AFMIDQ63HM1 303 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 DPPA4Q7L190 304 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 PIM3Q86V86 326 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 SLITRK4Q8IW52 837 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 TSEN2Q8NCE0 465 aaKnown RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 ECHDC3Q96DC8 303 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 CELF6Q96J87 481 aaKnown RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 EIF3CQ99613 913 aaKnown RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 CINPQ9BW66 212 aaPredicted RBP16.32■□□□□ 0.2
BRD9-201ENST00000466684 SLC39A8Q9C0K1 460 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 CYP4F12Q9HCS2 524 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 IL17BQ9UHF5 180 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 MOSPD1Q9UJG1 213 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 SIK3Q9Y2K2 1263 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 PCDHGA4Q9Y5G9 962 aa16.32■□□□□ 0.2
BRD9-201ENST00000466684 AGRPO00253 132 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 EEF2KO00418 725 aaKnown RBP16.31■□□□□ 0.2
BRD9-201ENST00000466684 CPNE6O95741 557 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 ETV5P41161 510 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 RGRP47804 291 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
BRD9-201ENST00000466684 RFTN1Q14699 578 aaPredicted RBP16.31■□□□□ 0.2
BRD9-201ENST00000466684 CLPPQ16740 277 aaPredicted RBP16.31■□□□□ 0.2
BRD9-201ENST00000466684 PPP1R15BQ5SWA1 713 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 PNCKQ6P2M8 343 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 ATG14Q6ZNE5 492 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 VASH2Q86V25 355 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 ZFAND4Q86XD8 727 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 DTX1Q86Y01 620 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 NEK11Q8NG66 645 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 SEMA3CQ99985 751 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 SP110Q9HB58 689 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 FOXJ2Q9P0K8 574 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 AP4E1Q9UPM8 1137 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 MAST4O15021 2626 aa16.31■□□□□ 0.2
BRD9-201ENST00000466684 PRSS38A1L453 326 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 C9orf172C9J069 976 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.3■□□□□ 0.2
BRD9-201ENST00000466684 DAPK3O43293 454 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 FAM87AP0C7U9 286 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 B4GALNT1Q00973 533 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 ACOX1Q15067 660 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 SFTPA2Q8IWL1 248 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 AGPAT1Q99943 283 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 LGR4Q9BXB1 951 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 SEMA6CQ9H3T2 930 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 KCTD5Q9NXV2 234 aa16.3■□□□□ 0.2
BRD9-201ENST00000466684 RHPN2P1A8MT19 583 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 HGSO14964 777 aaPredicted RBP16.29■□□□□ 0.2
BRD9-201ENST00000466684 TEX33O43247 280 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 MYCLP1P12525 358 aaPredicted RBP16.29■□□□□ 0.2
BRD9-201ENST00000466684 CCNB1P14635 433 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 ITGB6P18564 788 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 SCNN1BP51168 640 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 RENBPP51606 427 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 AP1S1P61966 158 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 ILF3Q12906 894 aaKnown RBP eCLIP16.29■□□□□ 0.2
BRD9-201ENST00000466684 TMPRSS9Q7Z410 1059 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 ANKRD20A12PQ8NF67 263 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 CCL4L1Q8NHW4 92 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 GPBAR1Q8TDU6 330 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 GSDMCQ9BYG8 508 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 TRIM4Q9C037 500 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 DHX35Q9H5Z1 703 aaKnown RBP16.29■□□□□ 0.2
BRD9-201ENST00000466684 CARS2Q9HA77 564 aaKnown RBP16.29■□□□□ 0.2
BRD9-201ENST00000466684 RDH14Q9HBH5 336 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 PHPT1Q9NRX4 125 aaPredicted RBP16.29■□□□□ 0.2
BRD9-201ENST00000466684 GPATCH2LQ9NWQ4 482 aa16.29■□□□□ 0.2
BRD9-201ENST00000466684 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.28■□□□□ 0.2
BRD9-201ENST00000466684 STMND1H3BQB6 276 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 DFFAO00273 331 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 TRAFD1O14545 582 aaPredicted RBP16.28■□□□□ 0.2
BRD9-201ENST00000466684 TERTO14746 1132 aaKnown RBP16.28■□□□□ 0.2
BRD9-201ENST00000466684 B4GAT1O43505 415 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 PPFIA2O75334 1257 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 CCDC172P0C7W6 258 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 GM2AP17900 193 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 NFKBIAP25963 317 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 ALDH4A1P30038 563 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 IL10RBQ08334 325 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 BIRC2Q13490 618 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 PEX6Q13608 980 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 C16orf72Q14CZ0 275 aa16.28■□□□□ 0.2
BRD9-201ENST00000466684 TBR1Q16650 682 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms