RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 ZFP42Q96MM3 310 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 RIT2Q99578 217 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 WDR18Q9BV38 432 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 AMNQ9BXJ7 453 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 FRMD8P1Q9BZ68 369 aaPredicted RBP4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 GPR62Q9BZJ7 368 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 ZNF552Q9H707 407 aaPredicted RBP4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 SPACA1Q9HBV2 294 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 PALMDQ9NP74 551 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 BRD7Q9NPI1 651 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 GCNT4Q9P109 453 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 POLLQ9UGP5 575 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 KLHL3Q9UH77 587 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 AKT3Q9Y243 479 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 ADGRA3Q8IWK6 1321 aa4.46□□□□□ -1.69
CLCA3P-202ENST00000466454 LOC100653049A0A140TA62 436 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 J3QW42 95 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 SNX3O60493 162 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 KRT34O76011 436 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 UBOX5O94941 541 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 LMNAP02545 664 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 SELLP14151 372 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 PRKCAP17252 672 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 AGAP20933 346 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ACAT1P24752 427 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ARL3P36405 182 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 AFF1P51825 1210 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 MAGOHP61326 146 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 GPC5P78333 572 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 BASP1P80723 227 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 GCNT1Q02742 428 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FSTL1Q12841 308 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 TDGQ13569 410 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 HSP90AA5PQ58FG0 334 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 EFHC1Q5JVL4 640 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 C1orf220Q5T0J3 134 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 KANK2Q63ZY3 851 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 KCTD16Q68DU8 428 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ZNF598Q86UK7 904 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ZNF679Q8IYX0 411 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 UBL4BQ8N7F7 174 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FRMD1Q8N878 549 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 KREMEN2Q8NCW0 462 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 OR2T34Q8NGX1 318 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 SLC22A8Q8TCC7 542 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 DDI1Q8WTU0 396 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 CKAP2Q8WWK9 683 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 CORO2AQ92828 525 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 MAGOHBQ96A72 148 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ZDHHC12Q96GR4 267 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 IFT74Q96LB3 600 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FBXL18Q96ME1 805 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 MRPL37Q9BZE1 423 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 TLE6Q9H808 572 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 EVA1AQ9H8M9 152 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 PCDHB16Q9NRJ7 776 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 TMEM184CQ9NVA4 438 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ASH2LQ9UBL3 628 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 PCDHB1Q9Y5F3 818 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 HS3ST4Q9Y661 456 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 SCN4AP35499 1836 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 IGSF9BQ9UPX0 1349 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 A0A1W2PNR3 127 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 MAGEB16A2A368 324 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 OR6C76A6NM76 312 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 E9PBE3 544 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FAM86B1E9PN63 330 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FCHO1O14526 889 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 AXIN1O15169 862 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ATP5HO75947 161 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 AKR7A3O95154 331 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 KLHL2O95198 593 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 OR5F1O95221 314 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 KCNK5O95279 499 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ATP6V1G2O95670 118 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 DLGAP3O95886 979 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 LIPFP07098 398 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FAM86B2P0C5J1 330 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 UBL4AP11441 157 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 CHRNB2P17787 502 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 NME2P22392 152 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 CSTF2P33240 577 aaKnown RBP eCLIP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 COILP38432 576 aaPredicted RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 ETV3P41162 512 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 SLC1A1P43005 524 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 RPS16P62249 146 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 GTF2BQ00403 316 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 USP10Q14694 798 aaKnown RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 DRAP1Q14919 205 aaPredicted RBP4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 UBE2SQ16763 222 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 SMTNL2Q2TAL5 461 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 PCGF3Q3KNV8 242 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 PLA1AQ53H76 456 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 CT83Q5H943 113 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FAM69AQ5T7M9 428 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 IER5Q5VY09 327 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 FAM91A1Q658Y4 838 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 DEGS2Q6QHC5 323 aa4.46□□□□□ -1.7
CLCA3P-202ENST00000466454 TMEM179Q6ZVK1 233 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms