RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PRF1P14222 555 aa6□□□□□ -1.45
NCL-208ENST00000466274 TRIM21P19474 475 aaKnown RBP6□□□□□ -1.45
NCL-208ENST00000466274 HLA-FP30511 346 aa6□□□□□ -1.45
NCL-208ENST00000466274 NNMTP40261 264 aa6□□□□□ -1.45
NCL-208ENST00000466274 RECQLP46063 649 aaPredicted RBP6□□□□□ -1.45
NCL-208ENST00000466274 CACNA2D1P54289 1103 aa6□□□□□ -1.45
NCL-208ENST00000466274 TNNC1P63316 161 aa6□□□□□ -1.45
NCL-208ENST00000466274 STK3Q13188 491 aa6□□□□□ -1.45
NCL-208ENST00000466274 ZNF174Q15697 407 aa6□□□□□ -1.45
NCL-208ENST00000466274 DEFB133Q30KQ1 61 aa6□□□□□ -1.45
NCL-208ENST00000466274 C9orf64Q5T6V5 341 aa6□□□□□ -1.45
NCL-208ENST00000466274 RNF219Q5W0B1 726 aaPredicted RBP6□□□□□ -1.45
NCL-208ENST00000466274 STEAP3Q658P3 488 aa6□□□□□ -1.45
NCL-208ENST00000466274 NUGGCQ68CJ6 796 aa6□□□□□ -1.45
NCL-208ENST00000466274 DENND5AQ6IQ26 1287 aa6□□□□□ -1.45
NCL-208ENST00000466274 NEK5Q6P3R8 708 aa6□□□□□ -1.45
NCL-208ENST00000466274 SPNS3Q6ZMD2 512 aa6□□□□□ -1.45
NCL-208ENST00000466274 ZNF227Q86WZ6 799 aa6□□□□□ -1.45
NCL-208ENST00000466274 DENND1CQ8IV53 801 aa6□□□□□ -1.45
NCL-208ENST00000466274 CCDC117Q8IWD4 279 aaPredicted RBP6□□□□□ -1.45
NCL-208ENST00000466274 DIS3L2Q8IYB7 885 aaKnown RBP6□□□□□ -1.45
NCL-208ENST00000466274 MMP21Q8N119 569 aa6□□□□□ -1.45
NCL-208ENST00000466274 ZNF276Q8N554 614 aa6□□□□□ -1.45
NCL-208ENST00000466274 AADATQ8N5Z0 425 aa6□□□□□ -1.45
NCL-208ENST00000466274 SYT2Q8N9I0 419 aaPredicted RBP6□□□□□ -1.45
NCL-208ENST00000466274 TMEM145Q8NBT3 493 aa6□□□□□ -1.45
NCL-208ENST00000466274 OR6C4Q8NGE1 309 aa6□□□□□ -1.45
NCL-208ENST00000466274 LMX1AQ8TE12 382 aa6□□□□□ -1.45
NCL-208ENST00000466274 JPH3Q8WXH2 748 aaPredicted RBP6□□□□□ -1.45
NCL-208ENST00000466274 PTPRN2Q92932 1015 aa6□□□□□ -1.45
NCL-208ENST00000466274 HDAC11Q96DB2 347 aa6□□□□□ -1.45
NCL-208ENST00000466274 MBD6Q96DN6 1003 aa6□□□□□ -1.45
NCL-208ENST00000466274 MRRFQ96E11 262 aaKnown RBP6□□□□□ -1.45
NCL-208ENST00000466274 TMA16Q96EY4 203 aaKnown RBP6□□□□□ -1.45
NCL-208ENST00000466274 SLC45A3Q96JT2 553 aa6□□□□□ -1.45
NCL-208ENST00000466274 TNIP3Q96KP6 325 aa6□□□□□ -1.45
NCL-208ENST00000466274 CGRRF1Q99675 332 aa6□□□□□ -1.45
NCL-208ENST00000466274 FAM213AQ9BRX8 229 aa6□□□□□ -1.45
NCL-208ENST00000466274 L2HGDHQ9H9P8 463 aa6□□□□□ -1.45
NCL-208ENST00000466274 PARVGQ9HBI0 331 aa6□□□□□ -1.45
NCL-208ENST00000466274 RBAKQ9NYW8 714 aaPredicted RBP6□□□□□ -1.45
NCL-208ENST00000466274 FOXJ2Q9P0K8 574 aa6□□□□□ -1.45
NCL-208ENST00000466274 SPASTQ9UBP0 616 aa6□□□□□ -1.45
NCL-208ENST00000466274 CROTQ9UKG9 612 aa6□□□□□ -1.45
NCL-208ENST00000466274 CLEC4EQ9ULY5 219 aa6□□□□□ -1.45
NCL-208ENST00000466274 DNHD1Q96M86 4753 aa6□□□□□ -1.45
NCL-208ENST00000466274 ZNF638Q14966 1978 aaKnown RBP6□□□□□ -1.45
NCL-208ENST00000466274 A6NNZ2 444 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 SLC31A1O15431 190 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 RPLP0P05388 317 aaKnown RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 SCG5P05408 212 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 ANXA6P08133 673 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 HMBSP08397 361 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 PRKAR1AP10644 381 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 LIFP15018 202 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 ITIH1P19827 911 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 PDCP20941 246 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 HNRNPA2B1P22626 353 aaKnown RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 HOXD9P28356 352 aaPredicted RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 GTF2BQ00403 316 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 CDC20Q12834 499 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 LSAMPQ13449 338 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 ELAVL3Q14576 367 aaKnown RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 ICAM4Q14773 271 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 ZRSR1Q15695 479 aaKnown RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 DEFB109BQ30KR1 87 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 ZNF542PQ5EBM4 170 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 SLC39A4Q6P5W5 647 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 TEPPQ6URK8 271 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 CRELD2Q6UXH1 353 aaPredicted RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 Q6ZSR6 202 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 KIAA0907Q7Z7F0 614 aaPredicted RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 PARGQ86W56 976 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 BRSK2Q8IWQ3 736 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 PPIL6Q8IXY8 311 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 CACNA2D3Q8IZS8 1091 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 CCDC112Q8NEF3 446 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 PDCD6IPQ8WUM4 868 aaKnown RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 TTC17Q96AE7 1141 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 CLIC6Q96NY7 704 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 TAAR9Q96RI9 348 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 BOCQ9BWV1 1114 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 UNKQ9C0B0 810 aaKnown RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 MTMR12Q9C0I1 747 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 TGIF2Q9GZN2 237 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 TMEM168Q9H0V1 697 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 GPN2Q9H9Y4 310 aaPredicted RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 TMEM30AQ9NV96 361 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
NCL-208ENST00000466274 SIX4Q9UIU6 781 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 RASAL2Q9UJF2 1139 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 ERRFI1Q9UJM3 462 aaPredicted RBP5.99□□□□□ -1.45
NCL-208ENST00000466274 EXOC7Q9UPT5 735 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 PCDHB4Q9Y5E5 795 aa5.99□□□□□ -1.45
NCL-208ENST00000466274 MYO18AQ92614 2054 aaKnown RBP5.98□□□□□ -1.45
NCL-208ENST00000466274 ADGRG4Q8IZF6 3080 aa5.98□□□□□ -1.45
NCL-208ENST00000466274 MYLKQ15746 1914 aa5.98□□□□□ -1.45
NCL-208ENST00000466274 TYW5A2RUC4 315 aaKnown RBP5.98□□□□□ -1.45
NCL-208ENST00000466274 NPEPPSL1A6NEC2 478 aa5.98□□□□□ -1.45
NCL-208ENST00000466274 ANKRD63C9JTQ0 380 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms