RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CLIC3O95833 236 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 PAMP19021 973 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 RXRGP48443 463 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ZNF135P52742 658 aaPredicted RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 NME3Q13232 169 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 BROXQ5VW32 411 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 GALNT18Q6P9A2 607 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 PPHLN1Q8NEY8 458 aaKnown RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 C19orf60Q96EN9 201 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 SLC2A13Q96QE2 648 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ZNF347Q96SE7 839 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 CYP2S1Q96SQ9 504 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 LPIN3Q9BQK8 851 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 ARMC7Q9H6L4 198 aa19.8■□□□□ 0.76
SDF4-205ENST00000465727 GPC6Q9Y625 555 aaPredicted RBP19.8■□□□□ 0.76
SDF4-205ENST00000465727 SHROOM3Q8TF72 1996 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 SYNJ2BP-COX16A0A087WUM0 186 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 NRP1O14786 923 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CACNG3O60359 315 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 TPST1O60507 370 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 ARIH2O95376 493 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 LTA4HP09960 611 aaKnown RBP19.79■□□□□ 0.76
SDF4-205ENST00000465727 CPB1P15086 417 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 MATN1P21941 496 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 YWHAQP27348 245 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 OXTRP30559 389 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 ETFBP38117 255 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 SLC1A2P43004 574 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 PITX1P78337 314 aaPredicted RBP19.79■□□□□ 0.76
SDF4-205ENST00000465727 ZNF33AQ06730 810 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 TNK2Q07912 1038 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 ADIGQ0VDE8 80 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CSHL1Q14406 222 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CBX2Q14781 532 aaPredicted RBP19.79■□□□□ 0.76
SDF4-205ENST00000465727 KIAA0408Q6ZU52 694 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CCDC138Q96M89 665 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 NANOGQ9H9S0 305 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CYP4F12Q9HCS2 524 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 PIGVQ9NUD9 493 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 COX16Q9P0S2 106 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 ARSAP15289 507 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 ITGADQ13349 1161 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 OXA1LQ15070 435 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CYP51A1Q16850 503 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 KIF19Q2TAC6 998 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CYHR1Q6ZMK1 362 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 LINC00299Q6ZSB3 139 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 IGFN1Q86VF2 1251 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 PTRH1Q86Y79 214 aaKnown RBP19.79■□□□□ 0.76
SDF4-205ENST00000465727 NPWQ8N729 165 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 SLC2A14Q8TDB8 520 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 SPATA33Q96N06 139 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 MROQ9BYG7 248 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 TRIM54Q9BYV2 358 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 RAD21L1Q9H4I0 556 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 GSTO2Q9H4Y5 243 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 CHST12Q9NRB3 414 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 GMPR2Q9P2T1 348 aaKnown RBP19.79■□□□□ 0.76
SDF4-205ENST00000465727 EGFL7Q9UHF1 273 aa19.79■□□□□ 0.76
SDF4-205ENST00000465727 C1orf232A0A0U1RR37 186 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 FAM72CH0Y354 149 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 FXYD1O00168 92 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 NR5A2O00482 541 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 PPEF2O14830 753 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 MATN4O95460 622 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 ALDOCP09972 364 aaKnown RBP19.78■□□□□ 0.76
SDF4-205ENST00000465727 IMPDH1P20839 514 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 KCNA5P22460 613 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 SLC6A2P23975 617 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 EIF2B2P49770 351 aaKnown RBP19.78■□□□□ 0.76
SDF4-205ENST00000465727 CXCL9Q07325 125 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 ZNF846Q147U1 533 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 ACAP2Q15057 778 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 ZNF484Q5JVG2 852 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 FAM72AQ5TYM5 149 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 BTBD8Q5XKL5 378 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 FAM72DQ6L9T8 149 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 PIGZQ86VD9 579 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 FAM72BQ86X60 149 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 RNF169Q8NCN4 708 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 BEST2Q8NFU1 509 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 OSCP1Q8WVF1 389 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 TAMM41Q96BW9 452 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 L3HYPDHQ96EM0 354 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 GLT1D1Q96MS3 346 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 TBL1YQ9BQ87 522 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 YIPF2Q9BWQ6 316 aa19.78■□□□□ 0.76
SDF4-205ENST00000465727 TUT1Q9H6E5 874 aaKnown RBP19.78■□□□□ 0.76
SDF4-205ENST00000465727 KIAA1522Q9P206 1035 aaPredicted RBP19.78■□□□□ 0.76
SDF4-205ENST00000465727 ARNTP27540 789 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 GNA12Q03113 381 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 CYP2A13Q16696 494 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 DCAF4L1Q3SXM0 396 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 AASDHQ4L235 1098 aaPredicted RBP19.77■□□□□ 0.76
SDF4-205ENST00000465727 MIER2Q8N344 545 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 TTC30BQ8N4P2 665 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 SNX31Q8N9S9 440 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 MAGEE2Q8TD90 523 aaPredicted RBP19.77■□□□□ 0.76
SDF4-205ENST00000465727 ZC3H15Q8WU90 426 aaKnown RBP19.77■□□□□ 0.76
SDF4-205ENST00000465727 DPF3Q92784 378 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms