RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	ZNF778	Q96MU6	729 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	TTC25	Q96NG3	672 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	SRPK1	Q96SB4	655 aa	Known RBP	13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	HDAC8	Q9BY41	377 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	LRRC4C	Q9HCJ2	640 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	POLM	Q9NP87	494 aa	Predicted RBP	13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	PCDH12	Q9NPG4	1184 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	C2orf42	Q9NWW7	574 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	HACD3	Q9P035	362 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	B4GALT6	Q9UBX8	382 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	RPS6KL1	Q9Y6S9	549 aa		13.43	□□□□□ -0.26
ATF3-208	ENST00000465155	C1orf232	A0A0U1RR37	186 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	FAM237B	A0A1B0GVD1	139 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155		A0A1W2PP55	124 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	MROH6	A6NGR9	719 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	C2orf81	A6NN90	581 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	LDB2	O43679	373 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	BUD23	O43709	281 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	USP1	O94782	785 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	POLB	P06746	335 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	DCN	P07585	359 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	CYP2A6	P11509	494 aa	Predicted RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	NDUFV2	P19404	249 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	NMBR	P28336	390 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	DRD3	P35462	400 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	DGKE	P52429	567 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	GPX6	P59796	221 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	LAMB3	Q13751	1172 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ERAP2	Q6P179	960 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	UNC5A	Q6ZN44	842 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	C3orf62	Q6ZUJ4	267 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	TSPAN33	Q86UF1	283 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	HDDC3	Q8N4P3	179 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ZNF669	Q96BR6	464 aa	Predicted RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	MFSD3	Q96ES6	412 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	SIPA1	Q96FS4	1042 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	MRGPRX1	Q96LB2	322 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	LYSMD1	Q96S90	227 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	GPR63	Q9BZJ6	419 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	CHRD	Q9H2X0	955 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	PABPC3	Q9H361	631 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	TRABD	Q9H4I3	376 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	VPS37B	Q9H9H4	285 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	MRM3	Q9HC36	420 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	KCTD3	Q9Y597	815 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	SCN8A	Q9UQD0	1980 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	DYNC1I1	O14576	645 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	RIPK2	O43353	540 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	RNASEH2A	O75792	299 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	CLDN7	O95471	211 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	PDGFB	P01127	241 aa	Predicted RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ACADM	P11310	421 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	GABRG2	P18507	467 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	LHCGR	P22888	699 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	VIPR1	P32241	457 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	HSD17B3	P37058	310 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	RPS9	P46781	194 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	PTPRCAP	Q14761	206 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	CRYM	Q14894	314 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	UAP1	Q16222	522 aa	Predicted RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	CDKN3	Q16667	212 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ANKRD20A4	Q4UJ75	823 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	TSTD2	Q5T7W7	516 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	PIP5KL1	Q5T9C9	394 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ARMC3	Q5W041	872 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ESRP1	Q6NXG1	681 aa	Known RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	CRTC1	Q6UUV9	634 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	TMEM135	Q86UB9	458 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	TTC30B	Q8N4P2	665 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	MREG	Q8N565	214 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	GANC	Q8TET4	914 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	HMGB4	Q8WW32	186 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ANKRD7	Q92527	254 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	FCRL3	Q96P31	734 aa	Predicted RBP	13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	OMD	Q99983	421 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ZFYVE1	Q9HBF4	777 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	PLAC1	Q9HBJ0	212 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	FBXL12	Q9NXK8	326 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	SERGEF	Q9UGK8	458 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	SLC2A6	Q9UGQ3	507 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	SCML1	Q9UN30	329 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	ITM2B	Q9Y287	266 aa		13.42	□□□□□ -0.26
ATF3-208	ENST00000465155	LPO	P22079	712 aa	Predicted RBP	13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	HMGCL	P35914	325 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	MMP12	P39900	470 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	SUOX	P51687	545 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	ZNF140	P52738	457 aa	Predicted RBP	13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	PDE1B	Q01064	536 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	ZBTB16	Q05516	673 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	ELP6	Q0PNE2	266 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	ARHGEF7	Q14155	803 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	SLC29A2	Q14542	456 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	TTC31	Q49AM3	519 aa	Predicted RBP	13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	SPANXN3	Q5MJ09	141 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	AGBL4	Q5VU57	503 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	STEAP4	Q687X5	459 aa		13.41	□□□□□ -0.26
ATF3-208	ENST00000465155	LRRC66	Q68CR7	880 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms