RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 HOXA2O43364 376 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 RAMP2O60895 175 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 PEX11BO96011 259 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 MT-CYBP00156 380 aaPredicted RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 NPPAP01160 153 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 IGLV3-27P01718 113 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SNRPB2P08579 225 aaKnown RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 CTSHP09668 335 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 CKBP12277 381 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 RAG1P15918 1043 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SELPP16109 830 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SAT1P21673 171 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 ARNTP27540 789 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 EPHA3P29320 983 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 RFC2P35250 354 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 ALDH1A3P47895 512 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SUOXP51687 545 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 ITKQ08881 620 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SEPT6Q14141 434 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 TRIM25Q14258 630 aaKnown RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 POLD3Q15054 466 aaPredicted RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 TRIP10Q15642 601 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 MS4A13Q5J8X5 152 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SAMD4BQ5PRF9 694 aaKnown RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 VWA5B1Q5TIE3 1220 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 HECTD2Q5U5R9 776 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 ZNF280DQ6N043 979 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 TXNDC11Q6PKC3 985 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SLC30A9Q6PML9 568 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 HPS6Q86YV9 775 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 CEP97Q8IW35 865 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SCN4BQ8IWT1 228 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 C7orf61Q8IZ16 206 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 ZNF683Q8IZ20 524 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 SCAMP5Q8TAC9 235 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 MAPK15Q8TD08 544 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.54□□□□□ -1.04
ACTB-208ENST00000464611 ZUFSPQ96AP4 578 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 ZFRQ96KR1 1074 aaKnown RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 DDX50Q9BQ39 737 aaKnown RBP8.54□□□□□ -1.04
ACTB-208ENST00000464611 NUF2Q9BZD4 464 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 CYP4F11Q9HBI6 524 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 IGSF5Q9NSI5 407 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 TMLHEQ9NVH6 421 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 NDUFAF1Q9Y375 327 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 DTNAQ9Y4J8 743 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 TRAF6Q9Y4K3 522 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 NUP205Q92621 2012 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 PTPRDP23468 1912 aa8.54□□□□□ -1.04
ACTB-208ENST00000464611 CARNS1A5YM72 827 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 ENO4A6NNW6 628 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 PRAMEF11O60813 436 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 RPP40O75818 363 aaKnown RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 WISP3O95389 354 aaPredicted RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 S1PR4O95977 384 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 PYGLP06737 847 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 CHRNGP07510 517 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 SERPINF2P08697 491 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 NUDT7P0C024 238 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 CCDC166P0CW27 439 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 PAX7P23759 505 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 CHN2P52757 468 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 HERVK_113P63132 956 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 ROR2Q01974 943 aaKnown RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 FOXM1Q08050 763 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 GPR17Q13304 367 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 OLIG2Q13516 323 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 ADGRE1Q14246 886 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 PTK2BQ14289 1009 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 TRIM71Q2Q1W2 868 aaKnown RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 PABPC1LQ4VXU2 614 aaKnown RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 SLC39A12Q504Y0 691 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 KLHDC10Q6PID8 442 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 ZNF783Q6ZMS7 281 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 PRR23BQ6ZRT6 265 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 SPATA19Q7Z5L4 167 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 DENND6AQ8IWF6 608 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 COLGALT2Q8IYK4 626 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 GALNT15Q8N3T1 639 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 TMEM199Q8N511 208 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 NKAPQ8N5F7 415 aaKnown RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 STAG3L4Q8TBR4 150 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 PYDC1Q8WXC3 89 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 USP13Q92995 863 aaPredicted RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 PBXIP1Q96AQ6 731 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 ERVK-6Q9BXR3 956 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 CCDC68Q9H2F9 335 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 WDR55Q9H6Y2 383 aaPredicted RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 NT5MQ9NPB1 228 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 SPAG4Q9NPE6 437 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 MAN1C1Q9NR34 630 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
ACTB-208ENST00000464611 GID8Q9NWU2 228 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 TMEM161AQ9NX61 479 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 GTSE1Q9NYZ3 720 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 MARCH2Q9P0N8 246 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms