RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TRIM73Q86UV7 250 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 MAB21L3Q8N8X9 362 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 SELENOMQ8WWX9 145 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 RORBQ92753 470 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 OXCT2Q9BYC2 517 aaPredicted RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 ALG2Q9H553 416 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 COQ10BQ9H8M1 238 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 LIN28AQ9H9Z2 209 aaKnown RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 OPTCQ9UBM4 332 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 STK39Q9UEW8 545 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 PCDHGC4Q9Y5F7 938 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 FADS3Q9Y5Q0 445 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 NRP1O14786 923 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 RAD51BO15315 384 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 TLR5O60602 858 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 RFPL1O75677 317 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 ALDH1A1P00352 501 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 KRT6AP02538 564 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 KRT6BP04259 564 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 ZNF37AP17032 561 aaPredicted RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 SMPD1P17405 629 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 S100A3P33764 101 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 KRT6CP48668 564 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 RUNX1T1Q06455 604 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 PLD1Q13393 1074 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 CARTPTQ16568 116 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 SFT2D3Q587I9 215 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 EMC10Q5UCC4 262 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 NLGN2Q8NFZ4 835 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 ELMO1Q92556 727 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 LINGO1Q96FE5 620 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 TSSK3Q96PN8 268 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 TCF12Q99081 682 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 SYT11Q9BT88 431 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 TRIM8Q9BZR9 551 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 GBA3Q9H227 469 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 RSL24D1Q9UHA3 163 aaKnown RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 LNPEPQ9UIQ6 1025 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 LAMA4Q16363 1823 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 OR6B1O95007 311 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 PIGRP01833 764 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 ZNF7P17097 686 aaPredicted RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 ITGAXP20702 1163 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 AQP1P29972 269 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 SLC1A2P43004 574 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 ALDH9A1P49189 494 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 EIF2B2P49770 351 aaKnown RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 SLC5A3P53794 718 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 DAOAP59103 153 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 USP46P62068 366 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 TMEM214Q6NUQ4 689 aaKnown RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 NAPRTQ6XQN6 538 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 PATL1Q86TB9 770 aaKnown RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 EID3Q8N140 333 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 NAT14Q8WUY8 206 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 C19orf60Q96EN9 201 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 PTCD3Q96EY7 689 aaKnown RBP9.1□□□□□ -0.95
HPS4-208ENST00000464362 DYRK4Q9NR20 520 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 SNX8Q9Y5X2 465 aa9.1□□□□□ -0.95
HPS4-208ENST00000464362 FGF10O15520 208 aaPredicted RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 FAM20BO75063 409 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 EFNA1P20827 205 aaPredicted RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 CYP4F2P78329 520 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 SLC18A2Q05940 514 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 CYP4F3Q08477 520 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 TAF10Q12962 218 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 CRY1Q16526 586 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 CNPY1Q3B7I2 92 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 SYTL1Q8IYJ3 562 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 PGAM4Q8N0Y7 254 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 OR7D4Q8NG98 312 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 DENND1AQ8TEH3 1009 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 ITFG2Q969R8 447 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 PSMG2Q969U7 264 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 TEKT5Q96M29 485 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 FBRSL1Q9HCM7 1045 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 ZDHHC2Q9UIJ5 367 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 FZD10Q9ULW2 581 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 DGKBQ9Y6T7 804 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 LRP6O75581 1613 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 NUP188Q5SRE5 1749 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 AKAP11Q9UKA4 1901 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 SLC16A1P53985 500 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 MRPS6P82932 125 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 DUSP4Q13115 394 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 FAM45BPQ6NSW5 357 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 FAM151BQ6UXP7 276 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 TMEM26Q6ZUK4 368 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 OR4L1Q8NH43 312 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 FAM45AQ8TCE6 357 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 ZNF778Q96MU6 729 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 GPR21Q99679 349 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 NOL6Q9H6R4 1146 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 MYO5AQ9Y4I1 1855 aaKnown RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 NHSL1Q5SYE7 1610 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 NUP98P52948 1817 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 ARID1BQ8NFD5 2236 aaPredicted RBP9.09□□□□□ -0.95
HPS4-208ENST00000464362 MYO10Q9HD67 2058 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 NPEPPSL1A6NEC2 478 aa9.09□□□□□ -0.95
HPS4-208ENST00000464362 FAM159BA6NKW6 160 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms