RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 HGSO14964 777 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-210ENST00000464078 CREB3O43889 395 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 PPFIA2O75334 1257 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 ELFN1P0C7U0 828 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 WT1P19544 449 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-210ENST00000464078 STAT1P42224 750 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 B4GALNT1Q00973 533 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 CLEC16AQ2KHT3 1053 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 MAP9Q49MG5 647 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 TMEM164Q5U3C3 297 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 AFMIDQ63HM1 303 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 LIPIQ6XZB0 460 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 DPPA4Q7L190 304 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 MON1BQ7L1V2 547 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 HTR3CQ8WXA8 447 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 PCDHB18PQ96TA0 734 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 CNPY3Q9BT09 278 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 SELENOOQ9BVL4 669 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 SEMA6CQ9H3T2 930 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 DPEP2Q9H4A9 486 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 WDR26Q9H7D7 661 aa17.35■□□□□ 0.37
HMGN1-210ENST00000464078 MRPL40Q9NQ50 206 aaKnown RBP17.35■□□□□ 0.37
HMGN1-210ENST00000464078 SAMSN1Q9NSI8 373 aaKnown RBP17.35■□□□□ 0.37
HMGN1-210ENST00000464078 GEMIN8Q9NWZ8 242 aaKnown RBP17.35■□□□□ 0.37
HMGN1-210ENST00000464078 USP9YO00507 2555 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-210ENST00000464078 PRSS38A1L453 326 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 ANKRD62A6NC57 917 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 J3KR12 359 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 PDE2AO00408 941 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-210ENST00000464078 PRKCGP05129 697 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 GM2AP17900 193 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 RGRP47804 291 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 MAPK10P53779 464 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 POLR2FP61218 127 aaKnown RBP17.34■□□□□ 0.37
HMGN1-210ENST00000464078 NFKB2Q00653 900 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 SRSF1Q07955 248 aaKnown RBP eCLIP17.34■□□□□ 0.37
HMGN1-210ENST00000464078 CT47A1Q5JQC4 288 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-210ENST00000464078 PHF19Q5T6S3 580 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 SRLQ86TD4 932 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 PIM3Q86V86 326 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 GPBAR1Q8TDU6 330 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 ADNPQ9H2P0 1102 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 CLSTN2Q9H4D0 955 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 AKAP7Q9P0M2 348 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-210ENST00000464078 PCDHGA3Q9Y5H0 932 aa17.34■□□□□ 0.37
HMGN1-210ENST00000464078 EIF3CLB5ME19 914 aaKnown RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 STMND1H3BQB6 276 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 B4GAT1O43505 415 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 MYCLP1P12525 358 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 CCNB1P14635 433 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 TPI1P60174 286 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 POLR2LP62875 67 aaKnown RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 PPP1R15BQ5SWA1 713 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 DNAJC24Q6P3W2 148 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 SCYL2Q6P3W7 929 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 ZNF574Q6ZN55 896 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 TSEN2Q8NCE0 465 aaKnown RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 CCL4L1Q8NHW4 92 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 MCEEQ96PE7 176 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 EIF3CQ99613 913 aaKnown RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 LGR4Q9BXB1 951 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 SLC25A18Q9H1K4 315 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 RDH14Q9HBH5 336 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 CYP4F12Q9HCS2 524 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 FAM207AQ9NSI2 230 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 TAB2Q9NYJ8 693 aa17.33■□□□□ 0.36
HMGN1-210ENST00000464078 SPTAN1Q13813 2472 aaKnown RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 USP9XQ93008 2570 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-210ENST00000464078 ARHGAP42A6NI28 874 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 TRAFD1O14545 582 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-210ENST00000464078 EPHB6O15197 1021 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 KLK7P49862 253 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 AP1S1P61966 158 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 RPL7AP62424 266 aaKnown RBP17.32■□□□□ 0.36
HMGN1-210ENST00000464078 CYP4F2P78329 520 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 NSUN2Q08J23 767 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMGN1-210ENST00000464078 PNCKQ6P2M8 343 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 SLC12A9Q9BXP2 914 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 NLRC4Q9NPP4 1024 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 TRNAU1APQ9NX07 287 aaKnown RBP17.32■□□□□ 0.36
HMGN1-210ENST00000464078 KCTD5Q9NXV2 234 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 TEX15Q9BXT5 2789 aa17.32■□□□□ 0.36
HMGN1-210ENST00000464078 ZW10O43264 779 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 PALMO75781 387 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 GPR3P46089 330 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 ATP1A2P50993 1020 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 PAPOLAP51003 745 aaKnown RBP17.31■□□□□ 0.36
HMGN1-210ENST00000464078 ARSDP51689 593 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 BCL2L1Q07817 233 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 ILF3Q12906 894 aaKnown RBP eCLIP17.31■□□□□ 0.36
HMGN1-210ENST00000464078 TRA2AQ13595 282 aaKnown RBP eCLIP17.31■□□□□ 0.368e-24■■□□□ 11.7
HMGN1-210ENST00000464078 RFTN1Q14699 578 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-210ENST00000464078 CLCA4Q14CN2 919 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 NRROSQ86YC3 692 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 PELI3Q8N2H9 469 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 CELF6Q96J87 481 aaKnown RBP17.31■□□□□ 0.36
HMGN1-210ENST00000464078 COQ10AQ96MF6 247 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 TAAR9Q96RI9 348 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 NUDT22Q9BRQ3 303 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms