RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 MYO6Q9UM54 1294 aa4.36□□□□□ -1.71
USP9X-204ENST00000463829 ERVK-11Q9UQG0 969 aa4.36□□□□□ -1.71
USP9X-204ENST00000463829 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
USP9X-204ENST00000463829 CEPT1Q9Y6K0 416 aa4.36□□□□□ -1.71
USP9X-204ENST00000463829 FAM237AA0A1B0GTK4 181 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 TMEM202A6NGA9 273 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 LIPT2A6NK58 231 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 HNRNPCL1O60812 293 aaKnown RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 TIPRLO75663 272 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 IPO7O95373 1038 aaKnown RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 ZNF182P17025 639 aaPredicted RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 HOXB6P17509 224 aaKnown RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 PIGAP37287 484 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 SORDQ00796 357 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 TRAF2Q12933 501 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 NAE1Q13564 534 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 KRT24Q2M2I5 525 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 USP41Q3LFD5 358 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 TDRD12Q587J7 1177 aaKnown RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 TYW3Q6IPR3 259 aaKnown RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 PLEKHA7Q6IQ23 1121 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 TTI2Q6NXR4 508 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 MZT2BQ6NZ67 158 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 CCDC129Q6ZRS4 1044 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 WDR63Q8IWG1 891 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 ARHGAP12Q8IWW6 846 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 OR14A16Q8NHC5 309 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 POMGNT1Q8WZA1 660 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 ZBTB9Q96C00 473 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 TREX2Q9BQ50 279 aaPredicted RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 FAM110AQ9BQ89 295 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 NTPCRQ9BSD7 190 aaKnown RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 ITPAQ9BY32 194 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 MKKSQ9NPJ1 570 aaPredicted RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 EIF2B3Q9NR50 452 aaKnown RBP4.35□□□□□ -1.71
USP9X-204ENST00000463829 HCFC1R1Q9NWW0 138 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 ABI3Q9P2A4 366 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 PCDHA7Q9UN72 937 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 STON1Q9Y6Q2 735 aa4.35□□□□□ -1.71
USP9X-204ENST00000463829 A0A1W2PQF6 199 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 HMGB1P1B2RPK0 211 aaPredicted RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 AKR1B15C9JRZ8 316 aaPredicted RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 J3KR12 359 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 TIMM23O14925 209 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 HSPA12AO43301 675 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 GLUD1P00367 558 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 GLUD2P49448 558 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 PCYT1AP49585 367 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 MXI1P50539 228 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 CLNS1AP54105 237 aaKnown RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 RAD23BP54727 409 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 LINC00205P59089 165 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 NIPAL4Q0D2K0 466 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 C2orf68Q2NKX9 166 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 SLC45A4Q5BKX6 768 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 CXorf66Q5JRM2 361 aaPredicted RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 METTL2BQ6P1Q9 378 aaKnown RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 C8orf82Q6P1X6 216 aaPredicted RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 DLK2Q6UY11 383 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 QSOX2Q6ZRP7 698 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 IKBIPQ70UQ0 350 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 MTSS1LQ765P7 747 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 HAPLN4Q86UW8 402 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 SGCDQ92629 289 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 METTL2AQ96IZ6 378 aaKnown RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 TXNDC15Q96J42 360 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 CAMK1GQ96NX5 476 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 WDFY2Q96P53 400 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 TMEM47Q9BQJ4 181 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 SLC25A33Q9BSK2 321 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 IFIH1Q9BYX4 1025 aaKnown RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 EBF3Q9H4W6 596 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 GPR108Q9NPR9 543 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 SEPT11Q9NVA2 429 aaKnown RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 CNOT8Q9UFF9 292 aaKnown RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 RCOR1Q9UKL0 485 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 AGO1Q9UL18 857 aaKnown RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 CORO1CQ9ULV4 474 aaPredicted RBP4.34□□□□□ -1.71
USP9X-204ENST00000463829 ADAM18Q9Y3Q7 739 aa4.34□□□□□ -1.71
USP9X-204ENST00000463829 ANKRD18BA2A2Z9 1011 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 DYTNA2CJ06 578 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 MYO1GB0I1T2 1018 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 PTP4A3O75365 173 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 SLC25A12O75746 678 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 SERPINI2O75830 405 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 NKX2-2O95096 273 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 MLYCDO95822 493 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 DDX5P17844 614 aaKnown RBP4.33□□□□□ -1.72
USP9X-204ENST00000463829 C21orf33P30042 268 aaPredicted RBP4.33□□□□□ -1.72
USP9X-204ENST00000463829 MAPK4P31152 587 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 HNRNPH1P31943 449 aaKnown RBP4.33□□□□□ -1.72
USP9X-204ENST00000463829 PPARGP37231 505 aaPredicted RBP4.33□□□□□ -1.72
USP9X-204ENST00000463829 METAP2P50579 478 aaKnown RBP eCLIP4.33□□□□□ -1.72
USP9X-204ENST00000463829 F2RL1P55085 397 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 PRAMEP78395 509 aa4.33□□□□□ -1.72
USP9X-204ENST00000463829 CEBPZQ03701 1054 aaKnown RBP4.33□□□□□ -1.72
USP9X-204ENST00000463829 CRYZQ08257 329 aaKnown RBP4.33□□□□□ -1.72
USP9X-204ENST00000463829 MMEL1Q495T6 779 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms