RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 SF3B4Q15427 424 aaKnown RBP eCLIP2.78□□□□□ -1.965e-6■□□□□ 9.6
CNOT11-203ENST00000462489 GSTA3Q16772 222 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 ATP13A5Q4VNC0 1218 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 INTS11Q5TA45 600 aaKnown RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 LRRC8EQ6NSJ5 796 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 ANKRD54Q6NXT1 300 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 METTL2BQ6P1Q9 378 aaKnown RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 NOXA1Q86UR1 476 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 WDR63Q8IWG1 891 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 DHX40Q8IX18 779 aaKnown RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 SLC35F3Q8IY50 421 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 RFLNBQ8N5W9 214 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 HUS1BQ8NHY5 278 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 CREB3L4Q8TEY5 395 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 KLHL29Q96CT2 875 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 SAAL1Q96ER3 474 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 METTL2AQ96IZ6 378 aaKnown RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 SLC41A2Q96JW4 573 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 NR1H4Q96RI1 486 aaPredicted RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 HEMGNQ9BXL5 484 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 AGXT2Q9BYV1 514 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 NUF2Q9BZD4 464 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 PAIP1Q9H074 479 aaKnown RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 PRKRIP1Q9H875 184 aaPredicted RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 JMJD4Q9H9V9 463 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 EBF2Q9HAK2 575 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 C17orf75Q9HAS0 396 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 BPIFA1Q9NP55 256 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 UBN1Q9NPG3 1134 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 ASAH2Q9NR71 780 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 MCM9Q9NXL9 1143 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 ZNF224Q9NZL3 707 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 SLC9A2Q9UBY0 812 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 ZNF112Q9UJU3 913 aa2.78□□□□□ -1.96
CNOT11-203ENST00000462489 FBXO9Q9UK97 447 aaPredicted RBP2.78□□□□□ -1.96
CNOT11-203ENST00000462489 LRRC53A6NM62 1247 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 LDLRAD4O15165 306 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 BCAT2O15382 392 aaPredicted RBP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 PLRG1O43660 514 aaKnown RBP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 LDB3O75112 727 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 CLDN14O95500 239 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 LINC00271P0C7V0 271 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 RRM1P23921 792 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 EPHA8P29322 1005 aaPredicted RBP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 CDAP32320 146 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 GNAQP50148 359 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 METAP2P50579 478 aaKnown RBP eCLIP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 DDR1Q08345 913 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 ZNF155Q12901 538 aaPredicted RBP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 TNFAIP1Q13829 316 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 ZRSR1Q15695 479 aaKnown RBP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 USP41Q3LFD5 358 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 C9orf50Q5SZB4 431 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 C6orf141Q5SZD1 244 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 FAM69AQ5T7M9 428 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 ACAD10Q6JQN1 1059 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 B3GNT6Q6ZMB0 384 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 SLC46A3Q7Z3Q1 461 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 EXOC3L1Q86VI1 746 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 CHERPQ8IWX8 916 aaKnown RBP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 NAGSQ8N159 534 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 ZBTB2Q8N680 514 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 NEK9Q8TD19 979 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 TANKQ92844 425 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 KIF1BPQ96EK5 621 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 MPHOSPH8Q99549 860 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 HAUS8Q9BT25 410 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 RANBP17Q9H2T7 1088 aaKnown RBP2.77□□□□□ -1.97
CNOT11-203ENST00000462489 UBTD1Q9HAC8 227 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 PREBQ9HCU5 417 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 TAS2R10Q9NYW0 307 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 SIX4Q9UIU6 781 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 SNX9Q9Y5X1 595 aa2.77□□□□□ -1.97
CNOT11-203ENST00000462489 NOTCH4Q99466 2003 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 IGHV4OR15-8A0A075B7B6 117 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 SAA2-SAA4A0A096LPE2 208 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 A6NLC8 198 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 AKR1B15C9JRZ8 316 aaPredicted RBP2.76□□□□□ -1.97
CNOT11-203ENST00000462489 TULP2O00295 520 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 KRT86O43790 486 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 TMEM63AO94886 807 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 KDM4BO94953 1096 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 FASLGP48023 281 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 BRWD1-AS2P59051 145 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 NEXNQ0ZGT2 675 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 TROAPQ12815 778 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 OLIG2Q13516 323 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 KRT81Q14533 505 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 C2orf68Q2NKX9 166 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 MMEL1Q495T6 779 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 ZNF672Q499Z4 452 aaPredicted RBP2.76□□□□□ -1.97
CNOT11-203ENST00000462489 ALFQ53S48 1182 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 HSP90AB4PQ58FF6 505 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 GGNBP1Q5YKI7 109 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 LCTLQ6UWM7 567 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 CCNI2Q6ZMN8 369 aaPredicted RBP2.76□□□□□ -1.97
CNOT11-203ENST00000462489 KRBA2Q6ZNG9 492 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 TAOK1Q7L7X3 1001 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 CUZD1Q86UP6 607 aa2.76□□□□□ -1.97
CNOT11-203ENST00000462489 FOXRED2Q8IWF2 684 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms