RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 KDSRQ06136 332 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ZNF33AQ06730 810 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 SLC20A2Q08357 652 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 SERINC3Q13530 473 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 CDH18Q13634 790 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 PAFAH1B3Q15102 231 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 PDK2Q15119 407 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ANGPT1Q15389 498 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 PARP15Q460N3 678 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 INO80DQ53TQ3 878 aaPredicted RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 EOGTQ5NDL2 527 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 C9orf64Q5T6V5 341 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 SLC9A4Q6AI14 798 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 KIAA1211LQ6NV74 962 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 LRRC31Q6UY01 552 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 NT5DC3Q86UY8 548 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 WDR5BQ86VZ2 330 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 CIR1Q86X95 450 aaPredicted RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 LRRC49Q8IUZ0 686 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 SLITRK4Q8IW52 837 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 TMEM151BQ8IW70 566 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 KATNAL2Q8IYT4 538 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 SH2D3CQ8N5H7 860 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 RNF10Q8N5U6 811 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 LZTR1Q8N653 840 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ALLCQ8N6M5 410 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 PLD5Q8N7P1 536 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ACRBPQ8NEB7 543 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 RPLP0P6Q8NHW5 317 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 PCDH19Q8TAB3 1148 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ATRIPQ8WXE1 791 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 PTPRN2Q92932 1015 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ZNF419Q96HQ0 510 aaPredicted RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 HES6Q96HZ4 224 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ZC3H10Q96K80 434 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 OLFM3Q96PB7 478 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 TSGA13Q96PP4 275 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 SIK2Q9H0K1 926 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 RSPH9Q9H1X1 276 aaPredicted RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 EPC1Q9H2F5 836 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 MFSD1Q9H3U5 465 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 LUC7LQ9NQ29 371 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 DONSONQ9NYP3 566 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 USP36Q9P275 1121 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 CTTNBP2NLQ9P2B4 639 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 MYO1AQ9UBC5 1043 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 VPS51Q9UID3 782 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 TFR2Q9UP52 801 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ERVW-1Q9UQF0 538 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ALG6Q9Y672 507 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 STON1Q9Y6Q2 735 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ADAMTS20P59510 1910 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 CNOT1A5YKK6 2376 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 ZNF106Q9H2Y7 1883 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 SYNJ2BP-COX16A0A087WUM0 186 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 ZSCAN5CA6NGD5 496 aaPredicted RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 KDELR3O43731 214 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 PRAMEF11O60813 436 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ZNF205O95201 554 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 MT-CO1P00395 513 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ATP5BP06576 529 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 CD48P09326 243 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 SRCP12931 536 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ERCC2P18074 760 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 GABRG2P18507 467 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 CR2P20023 1033 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 COMTP21964 271 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 KDELR1P24390 212 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 EPHB2P29323 1055 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 OR1E1P30953 314 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 CNR2P34972 360 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 P2RY2P41231 377 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 CDKN2BP42772 138 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 CTSKP43235 329 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 CSNK1DP48730 415 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 SERPINH1P50454 418 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 ECT2LQ008S8 904 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ZBTB16Q05516 673 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 GALNT2Q10471 571 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ZNF177Q13360 481 aaPredicted RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 ELAVL3Q14576 367 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 SPA17Q15506 151 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 PPP2R5EQ16537 467 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 HADHQ16836 314 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 ATP13A4Q4VNC1 1196 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 KCNT1Q5JUK3 1230 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 SPDYCQ5MJ68 293 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 NCBP2-AS2Q69YL0 99 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 GALNT18Q6P9A2 607 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 KLHDC8BQ8IXV7 354 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 TEX26Q8N6G2 289 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 SUMF1Q8NBK3 374 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 TXNDC5Q8NBS9 432 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 SPC24Q8NBT2 197 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 MDGA1Q8NFP4 955 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 EXD1Q8NHP7 514 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 UCMAQ8WVF2 138 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 CASKIN2Q8WXE0 1202 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 SORCS1Q8WY21 1168 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms