RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 KDELR1P24390 212 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 HK3P52790 923 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 E2F1Q01094 437 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 ITKQ08881 620 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 TARDBPQ13148 414 aaKnown RBP eCLIP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 C1orf61Q13536 156 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 TCEA2Q15560 299 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 ALG11Q2TAA5 492 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 C6orf132Q5T0Z8 1188 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 ARMC12Q5T9G4 340 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 FAXCQ5TGI0 409 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 ALG1LQ6GMV1 187 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 ESRP1Q6NXG1 681 aaKnown RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 ENPP7Q6UWV6 458 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 USP45Q70EL2 814 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 HID1Q8IV36 788 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 FSTL5Q8N475 847 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 TC2NQ8N9U0 490 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 IFI44Q8TCB0 444 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 CHD6Q8TD26 2715 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 RAPGEF5Q92565 580 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 FATE1Q969F0 183 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 TSACCQ96A04 125 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 HDAC11Q96DB2 347 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 RNF157Q96PX1 679 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 MCCC1Q96RQ3 725 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-204ENST00000462258 WDR26Q9H7D7 661 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 DTLQ9NZJ0 730 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 DKK4Q9UBT3 224 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 SALL4Q9UJQ4 1053 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 PHTF1Q9UMS5 762 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 RAI2Q9Y5P3 530 aa10.2□□□□□ -0.78
SF3A3-204ENST00000462258 LMO7DNF2Z398 122 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 PSMD11O00231 422 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 TAF4O00268 1085 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 TPP1O14773 563 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 SPOPO43791 374 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 ANXA6P08133 673 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 ALPIP09923 528 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 CTPS1P17812 591 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 CA4P22748 312 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 CCNCP24863 283 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 DSC2Q02487 901 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 CYP4F3Q08477 520 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 ARHGEF7Q14155 803 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 ELOCQ15369 112 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 NR0B2Q15466 257 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 CDKN3Q16667 212 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 ODF2Q5BJF6 829 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 DENND2CQ68D51 928 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 SLC9A4Q6AI14 798 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 GUSBP11Q6P575 273 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 NYAP1Q6ZVC0 841 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 EFL1Q7Z2Z2 1120 aaKnown RBP10.19□□□□□ -0.78
SF3A3-204ENST00000462258 VSIG1Q86XK7 387 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 SLC35F3Q8IY50 421 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 CCDC13Q8IYE1 715 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 PELI3Q8N2H9 469 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.19□□□□□ -0.78
SF3A3-204ENST00000462258 PLD5Q8N7P1 536 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 DCBLD1Q8N8Z6 715 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 OR56A4Q8NGH8 313 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 MAPK15Q8TD08 544 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 LRRN4Q8WUT4 740 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 GLMNQ92990 594 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 FUBP1Q96AE4 644 aaKnown RBP10.19□□□□□ -0.78
SF3A3-204ENST00000462258 DTD2Q96FN9 168 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 COQ10AQ96MF6 247 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 TSGA13Q96PP4 275 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 BOCQ9BWV1 1114 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 TDRD1Q9BXT4 1180 aaKnown RBP10.19□□□□□ -0.78
SF3A3-204ENST00000462258 CLPBQ9H078 707 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 FGF22Q9HCT0 170 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 RBM22Q9NW64 420 aaKnown RBP eCLIP10.19□□□□□ -0.783e-7■■■■□ 26.6
SF3A3-204ENST00000462258 AMACRQ9UHK6 382 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 INTUQ9ULD6 942 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 DOLKQ9UPQ8 538 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 SCN8AQ9UQD0 1980 aa10.19□□□□□ -0.78
SF3A3-204ENST00000462258 FAM208BQ5VWN6 2430 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 DSPP15924 2871 aaKnown RBP10.18□□□□□ -0.78
SF3A3-204ENST00000462258 ITPR1Q14643 2758 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 A0A0J9YYE9 177 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 GOLGA6CA6NDK9 693 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 GOLGA6BA6NDN3 693 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 TMEM202A6NGA9 273 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 CAPN8A6NHC0 703 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 C3orf70A6NLC5 250 aaPredicted RBP10.18□□□□□ -0.78
SF3A3-204ENST00000462258 KCNK1O00180 336 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 APOL1O14791 398 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 OPA1O60313 960 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 FZD6O60353 706 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 MT-CO3P00414 261 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 TRBC1P01850 177 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 PDHA1P08559 390 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 GOLGA6DP0CG33 693 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 MYCLP1P12525 358 aaPredicted RBP10.18□□□□□ -0.78
SF3A3-204ENST00000462258 KRT10P13645 584 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 TNNT1P13805 278 aa10.18□□□□□ -0.78
SF3A3-204ENST00000462258 CTSEP14091 401 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms