RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 LIFP15018 202 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 CR2P20023 1033 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 MMP8P22894 467 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 EPHB2P29323 1055 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 UGT1A3P35503 534 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 CASRP41180 1078 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 STAT1P42224 750 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 OR1D5P58170 312 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 RALGDSQ12967 914 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 TRA2AQ13595 282 aaKnown RBP eCLIP10.89□□□□□ -0.672e-11■■■■■ 49.5
CBX3-205ENST00000462165 TSR1Q2NL82 804 aaKnown RBP10.89□□□□□ -0.67
CBX3-205ENST00000462165 AMZ1Q400G9 498 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 PARP15Q460N3 678 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 CFAP58Q5T655 872 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 SLFN11Q7Z7L1 901 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 ZNF677Q86XU0 584 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 IL22RA1Q8N6P7 574 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 RCBTB1Q8NDN9 531 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 JOSD2Q8TAC2 188 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 GPT2Q8TD30 523 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 ZDHHC1Q8WTX9 485 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 FAM172AQ8WUF8 416 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 CATSPER2Q96P56 530 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 TUBGCP5Q96RT8 1024 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 NUDT22Q9BRQ3 303 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 NDST4Q9H3R1 872 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 PDFQ9HBH1 243 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 CYP4F12Q9HCS2 524 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 UBA2Q9UBT2 640 aaPredicted RBP10.89□□□□□ -0.67
CBX3-205ENST00000462165 ANAPC2Q9UJX6 822 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 PRSS38A1L453 326 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 RHPN2P1A8MT19 583 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 PDE2AO00408 941 aaPredicted RBP10.88□□□□□ -0.67
CBX3-205ENST00000462165 CYP1A1P04798 512 aaPredicted RBP10.88□□□□□ -0.67
CBX3-205ENST00000462165 PRKCGP05129 697 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 ELFN1P0C7U0 828 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 GM2AP17900 193 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 CD1CP29017 333 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 ALDH4A1P30038 563 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 GPR3P46089 330 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 CCR10P46092 362 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 CSNK1DP48730 415 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 LIMK2P53671 638 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 MAZP56270 477 aaKnown RBP10.88□□□□□ -0.67
CBX3-205ENST00000462165 GSCP56915 257 aaPredicted RBP10.88□□□□□ -0.67
CBX3-205ENST00000462165 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
CBX3-205ENST00000462165 VWA3BQ502W6 1294 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 MIIPQ5JXC2 388 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 AFMIDQ63HM1 303 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 LIPIQ6XZB0 460 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 NRROSQ86YC3 692 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 CAMK1DQ8IU85 385 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 UMODL1-AS1Q8N2C9 162 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 PYROXD2Q8N2H3 581 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 CCDC112Q8NEF3 446 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 PMEPA1Q969W9 287 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 ECHDC3Q96DC8 303 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 CCDC74BQ96LY2 380 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 DDA1Q9BW61 102 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 LGR4Q9BXB1 951 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 WDR26Q9H7D7 661 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 CATSPERBQ9H7T0 1116 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 SPATS2LQ9NUQ6 558 aaKnown RBP10.88□□□□□ -0.67
CBX3-205ENST00000462165 MOSPD1Q9UJG1 213 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 B3GALT1Q9Y5Z6 326 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 USP9YO00507 2555 aaPredicted RBP10.88□□□□□ -0.67
CBX3-205ENST00000462165 NBASA2RRP1 2371 aa10.88□□□□□ -0.67
CBX3-205ENST00000462165 ZNF891A8MT65 544 aaPredicted RBP10.87□□□□□ -0.67
CBX3-205ENST00000462165 F8VZ95 297 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 J3KR12 359 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 CAPN5O15484 640 aaPredicted RBP10.87□□□□□ -0.67
CBX3-205ENST00000462165 FGF1P05230 155 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 THRAP10827 490 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 KRT3P12035 628 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
CBX3-205ENST00000462165 UCHL3P15374 230 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 SERPINA4P29622 427 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 SQSTM1Q13501 440 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 IGFBP7Q16270 282 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 PNCKQ6P2M8 343 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 DPPA4Q7L190 304 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 PHLDB2Q86SQ0 1253 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 SPNS2Q8IVW8 549 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 CACNA2D3Q8IZS8 1091 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 PELI3Q8N2H9 469 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 AGBL5Q8NDL9 886 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 OR4D9Q8NGE8 314 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 SLC20A1Q8WUM9 679 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 SLC45A3Q96JT2 553 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 TUBGCP2Q9BSJ2 902 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 GSDMCQ9BYG8 508 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 STK33Q9BYT3 514 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 ASPSCR1Q9BZE9 553 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 LRRC19Q9H756 370 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 ATP13A3Q9H7F0 1226 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 CARS2Q9HA77 564 aaKnown RBP10.87□□□□□ -0.67
CBX3-205ENST00000462165 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
CBX3-205ENST00000462165 NOCTQ9UK39 431 aaKnown RBP10.87□□□□□ -0.67
CBX3-205ENST00000462165 MAN2B2Q9Y2E5 1009 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms