RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CCDC173Q0VFZ6 552 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 DPYSQ14117 519 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 TCEA2Q15560 299 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 IFI16Q16666 785 aaKnown RBP8.9□□□□□ -0.98
LDB1-203ENST00000461873 ARTNQ5T4W7 220 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 AFMIDQ63HM1 303 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 RAET1GQ6H3X3 334 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 GUSBP11Q6P575 273 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 CRTC1Q6UUV9 634 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 ARHGAP36Q6ZRI8 547 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 DPPA4Q7L190 304 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 ARHGAP12Q8IWW6 846 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 NPWQ8N729 165 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 NIPA2Q8N8Q9 360 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 ZNF248Q8NDW4 579 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 FAM46DQ8NEK8 389 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 BTBD6Q96KE9 485 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 ZNF578Q96N58 590 aaPredicted RBP8.9□□□□□ -0.98
LDB1-203ENST00000461873 GFM1Q96RP9 751 aaKnown RBP8.9□□□□□ -0.98
LDB1-203ENST00000461873 LRRC61Q9BV99 259 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 XPO4Q9C0E2 1151 aaKnown RBP8.9□□□□□ -0.98
LDB1-203ENST00000461873 SUDS3Q9H7L9 328 aaPredicted RBP8.9□□□□□ -0.98
LDB1-203ENST00000461873 GRPEL1Q9HAV7 217 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 PCDH18Q9HCL0 1135 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 CYP4F12Q9HCS2 524 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 NT5MQ9NPB1 228 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 LUC7LQ9NQ29 371 aaKnown RBP8.9□□□□□ -0.98
LDB1-203ENST00000461873 GPR27Q9NS67 375 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 PCDHGC4Q9Y5F7 938 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 CEP295Q9C0D2 2601 aa8.9□□□□□ -0.98
LDB1-203ENST00000461873 ARID1BQ8NFD5 2236 aaPredicted RBP8.89□□□□□ -0.99
LDB1-203ENST00000461873 A0A087WV48 116 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 PSMD11O00231 422 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 IL1R2P27930 398 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 EIF2S3P41091 472 aaKnown RBP8.89□□□□□ -0.99
LDB1-203ENST00000461873 GPR1P46091 355 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 UCNP55089 124 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 KIAA1024LP59773 190 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 MAXP61244 160 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 ILF3Q12906 894 aaKnown RBP eCLIP8.89□□□□□ -0.99
LDB1-203ENST00000461873 MESDQ14696 234 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 AGERQ15109 404 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 SLC18A3Q16572 532 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 ISXQ2M1V0 245 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 TBC1D25Q3MII6 688 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 C3orf38Q5JPI3 329 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 E4F1Q66K89 784 aaPredicted RBP8.89□□□□□ -0.99
LDB1-203ENST00000461873 HGSNATQ68CP4 663 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 CCDC70Q6NSX1 233 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 PNCKQ6P2M8 343 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 LIPIQ6XZB0 460 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 RHOT2Q8IXI1 618 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.89□□□□□ -0.99
LDB1-203ENST00000461873 ARFGAP1Q8N6T3 406 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 PCDH19Q8TAB3 1148 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 CCHCR1Q8TD31 782 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 NAF1Q96HR8 494 aaKnown RBP8.89□□□□□ -0.99
LDB1-203ENST00000461873 TMEM74Q96NL1 305 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 SEMA3CQ99985 751 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 CCDC3Q9BQI4 270 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 ZNF670Q9BS34 389 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 BOCQ9BWV1 1114 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 GSDMCQ9BYG8 508 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 POLR1BQ9H9Y6 1135 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 CARS2Q9HA77 564 aaKnown RBP8.89□□□□□ -0.99
LDB1-203ENST00000461873 NOD2Q9HC29 1040 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 RBM22Q9NW64 420 aaKnown RBP eCLIP8.89□□□□□ -0.99
LDB1-203ENST00000461873 B4GALT6Q9UBX8 382 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 KLF15Q9UIH9 416 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 RALYQ9UKM9 306 aaKnown RBP8.89□□□□□ -0.99
LDB1-203ENST00000461873 RAI2Q9Y5P3 530 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 ACACAQ13085 2346 aa8.89□□□□□ -0.99
LDB1-203ENST00000461873 LRRD1A4D1F6 860 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 RHPN2P1A8MT19 583 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 B4DGG1 531 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 TNFRSF10CO14798 259 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 MAFKO60675 156 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 GCATO75600 419 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 PROSCO94903 275 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 IPO7O95373 1038 aaKnown RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 ASMTLO95671 621 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 GYPCP04921 128 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 JMJD7P0C870 316 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 MYCLP1P12525 358 aaPredicted RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 TNNT1P13805 278 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 ZFXP17010 805 aaPredicted RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 TGM2P21980 687 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 CCNCP24863 283 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 GARSP41250 739 aaKnown RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 ARHGAP25P42331 645 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 RGRP47804 291 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 LSSP48449 732 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 ERVPABLB-1P60509 514 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 AP1B1Q10567 949 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 EIF3IQ13347 325 aaKnown RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 ALG11Q2TAA5 492 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 ANKRD20A8PQ5CZ79 823 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 BZW1Q7L1Q6 419 aaKnown RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 CNGA4Q8IV77 575 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 SLC35F3Q8IY50 421 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms