RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IRF2BP2Q7Z5L9 587 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 MB21D2Q8IYB1 491 aaPredicted RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 TMEM199Q8N511 208 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ZCCHC9Q8N567 271 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 TTC39CQ8N584 583 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ZBTB2Q8N680 514 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 NEXN-AS1Q8NBZ9 246 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 SMRP1Q8NCR6 262 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 BEST2Q8NFU1 509 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 HUS1BQ8NHY5 278 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ERGIC1Q969X5 290 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 NSUN4Q96CB9 384 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 RSRC1Q96IZ7 334 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 SLC41A2Q96JW4 573 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 TIGD1Q96MW7 591 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 GFM1Q96RP9 751 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 FAM110AQ9BQ89 295 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 PDZD7Q9H5P4 517 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ESRP2Q9H6T0 727 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 KIF9Q9HAQ2 790 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 MKKSQ9NPJ1 570 aaPredicted RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 EIF2B3Q9NR50 452 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 SLC45A1Q9Y2W3 748 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 AAR2Q9Y312 384 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 FAM237AA0A1B0GTK4 181 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 FRMD3A2A2Y4 597 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 EIF3CLB5ME19 914 aaKnown RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 MS4A18H0YCH9 400 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 K7ENM7 598 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 WNT9BO14905 357 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 RGS14O43566 566 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 IPO7O95373 1038 aaKnown RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 MMP2P08253 660 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 TFPIP10646 304 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 RARGP13631 454 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 PSMB10P40306 273 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 GARSP41250 739 aaKnown RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 PMS2P54278 862 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 F2RL1P55085 397 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 MYBPC2Q14324 1141 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 GPR18Q14330 331 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 DRAP1Q14919 205 aaPredicted RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 C2orf68Q2NKX9 166 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 USP41Q3LFD5 358 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 SOWAHCQ53LP3 525 aaPredicted RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 DCAF6Q58WW2 860 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 C6orf141Q5SZD1 244 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 C16orf54Q6UWD8 224 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 CCDC129Q6ZRS4 1044 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 COLCA1Q6ZS62 124 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 MTSS1LQ765P7 747 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 MEPCEQ7L2J0 689 aaKnown RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 PDILTQ8N807 584 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 ARRDC2Q8TBH0 407 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 SCFD2Q8WU76 684 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 MARK4Q96L34 752 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 C1orf74Q96LT6 269 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 CATSPERBQ9H7T0 1116 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 BPIFA1Q9NP55 256 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 POT1Q9NUX5 634 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 TMEM51Q9NW97 253 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 NSMCE4AQ9NXX6 385 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 DLGAP2Q9P1A6 1054 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 CNOT8Q9UFF9 292 aaKnown RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 VPS28Q9UK41 221 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 SRPRBQ9Y5M8 271 aaKnown RBP3.49□□□□□ -1.85
RFC4-211ENST00000460408 STON1Q9Y6Q2 735 aa3.49□□□□□ -1.85
RFC4-211ENST00000460408 NOTCH4Q99466 2003 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 RSF1Q96T23 1441 aaPredicted RBP3.48□□□□□ -1.85
RFC4-211ENST00000460408 TMEM202A6NGA9 273 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 J3KR12 359 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 AP3D1O14617 1153 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 TNFRSF13BO14836 293 aaPredicted RBP3.48□□□□□ -1.85
RFC4-211ENST00000460408 TIMM23O14925 209 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 SCAMP1O15126 338 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 VILLO15195 856 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 SPRY3O43610 288 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 NDUFB4O95168 129 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 SYF2O95926 243 aaKnown RBP3.48□□□□□ -1.85
RFC4-211ENST00000460408 FTCDO95954 541 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 ALOX12P18054 663 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 NLRP5P59047 1200 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 CREB5Q02930 508 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 PPATQ06203 517 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 GOLGA8DPQ0D2H9 430 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 ACVR2BQ13705 512 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 CTTNQ14247 550 aaKnown RBP3.48□□□□□ -1.85
RFC4-211ENST00000460408 IRF3Q14653 427 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 KRT24Q2M2I5 525 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 ASTE1Q2TB18 679 aaPredicted RBP3.48□□□□□ -1.85
RFC4-211ENST00000460408 DUSP28Q4G0W2 176 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 JADE1Q6IE81 842 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 KLHL35Q6PF15 583 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 SARM1Q6SZW1 724 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 GLDNQ6ZMI3 551 aaPredicted RBP3.48□□□□□ -1.85
RFC4-211ENST00000460408 Q6ZTK2 550 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 MON1BQ7L1V2 547 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 WDR63Q8IWG1 891 aa3.48□□□□□ -1.85
RFC4-211ENST00000460408 RPAP2Q8IXW5 612 aaPredicted RBP3.48□□□□□ -1.85
RFC4-211ENST00000460408 AADATQ8N5Z0 425 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms