RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF781Q8N8C0 355 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 ADCY4Q8NFM4 1077 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 DCAKDQ8WVC6 231 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 ELMO1Q92556 727 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 TK2O00142 265 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 SLC28A1O00337 649 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 SNAP91O60641 907 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 SLC22A3O75751 556 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 NOVP48745 357 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 TIGD2Q4W5G0 525 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 ABRAXAS1Q6UWZ7 409 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 METTL3Q86U44 580 aaKnown RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 OR4K2Q8NGD2 314 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 NT5C1B-RDH14C9J2C7 533 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 EFCAB14O75071 495 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 DUSP11O75319 330 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 NDST3O95803 873 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 SCNN1AP37088 669 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ITGA7Q13683 1181 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 DLG2Q15700 870 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 GPR158Q5T848 1215 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ZNF549Q6P9A3 640 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 SLC24A5Q71RS6 500 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ZCCHC7Q8N3Z6 543 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ATL1Q8WXF7 558 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 LPIN3Q9BQK8 851 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 BCO2Q9BYV7 579 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CEP44Q9C0F1 390 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PNPLA3Q9NST1 481 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 SNX10Q9Y5X0 201 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 COMMD3-BMI1R4GMX3 469 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 KPNA5O15131 536 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 UGT1A9O60656 530 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 OR1D2P34982 312 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ARL4DP49703 201 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 SLC25A11Q02978 314 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ARHGAP1Q07960 439 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 C1DQ13901 141 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 NCF4Q15080 339 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ZIK1Q3SY52 487 aaPredicted RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 RBFAQ8N0V3 343 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CNTD1Q8N815 330 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 AZIN2Q96A70 460 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PHF21AQ96BD5 680 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 C19orf60Q96EN9 201 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TBATAQ96M53 351 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 RERGLQ9H628 205 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 UGT1A7Q9HAW7 530 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 UGT1A10Q9HAW8 530 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 UGT1A8Q9HAW9 530 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 AHCYL1O43865 530 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PKMP14618 531 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 SP3Q02447 781 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 DSC2Q02487 901 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PAGE2BQ5JRK9 111 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PGAM4Q8N0Y7 254 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 GRIN3AQ8TCU5 1115 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TTPALQ9BTX7 342 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PRRG3Q9BZD7 231 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TBC1D30Q9Y2I9 924 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TRAV19A0A0A6YYK7 116 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ARL5CA6NH57 179 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PRDX6P30041 224 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 PFKPQ01813 784 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TGM3Q08188 693 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 DCTN2Q13561 401 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CDCA2Q69YH5 1023 aaPredicted RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 SPESP1Q6UW49 350 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TRAPPC5Q8IUR0 188 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 GMLQ99445 158 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 AGAP2Q99490 1192 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 C3orf18Q9UK00 162 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CARNS1A5YM72 827 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CAPN8A6NHC0 703 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ADSLP30566 484 aaPredicted RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 IDH3AP50213 366 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 MAPK10P53779 464 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TARBP2Q15633 366 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CRYBG2Q8N1P7 616 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 CAPN10Q9HC96 672 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 ZNHIT2Q9UHR6 403 aa14.79□□□□□ -0.04
PTPRU-205ENST00000460170 TDRKHQ9Y2W6 561 aaKnown RBP14.79□□□□□ -0.04
PTPRU-205ENST00000460170 DYTNA2CJ06 578 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 NTRK1P04629 796 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 HNRNPDQ14103 355 aaKnown RBP14.78□□□□□ -0.04
PTPRU-205ENST00000460170 CPSF6Q16630 551 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTPRU-205ENST00000460170 PDZK1P1A8MUH7 402 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 PRMT5O14744 637 aaPredicted RBP14.78□□□□□ -0.04
PTPRU-205ENST00000460170 XYLBO75191 536 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 ALDH1A2O94788 518 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 CCDC149Q6ZUS6 474 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 DET1Q7L5Y6 550 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 SFRP1Q8N474 314 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 FSTL5Q8N475 847 aaPredicted RBP14.78□□□□□ -0.04
PTPRU-205ENST00000460170 RSPH1Q8WYR4 309 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 DGCR6LQ9BY27 220 aa14.78□□□□□ -0.04
PTPRU-205ENST00000460170 KRCC1Q9NPI7 259 aaPredicted RBP14.78□□□□□ -0.04
PTPRU-205ENST00000460170 KLHL28Q9NXS3 571 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms