RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 COMTP21964 271 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 NOP2P46087 812 aaKnown RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 DUSP3P51452 185 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 PPIDQ08752 370 aaKnown RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 CNGA3Q16281 694 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 SLC9A4Q6AI14 798 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 USP45Q70EL2 814 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 CCDC13Q8IYE1 715 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 FSTL5Q8N475 847 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 PLD5Q8N7P1 536 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 PLA2G15Q8NCC3 412 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 TPCN2Q8NHX9 752 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 SCRN2Q96FV2 425 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 COQ10AQ96MF6 247 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 WDR92Q96MX6 357 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 MCCC1Q96RQ3 725 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 LRRC61Q9BV99 259 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 TCEAL2Q9H3H9 227 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-203ENST00000459756 SALL4Q9UJQ4 1053 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 PPIL1Q9Y3C6 166 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 TTLL3Q9Y4R7 772 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 PCDHA13Q9Y5I0 950 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 HEY1Q9Y5J3 304 aa16.16■□□□□ 0.18
COL7A1-203ENST00000459756 LY6G6EA0A0G2JKS1 128 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 PSMD11O00231 422 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 FZD6O60353 706 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 GCATO75600 419 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 RASGRP1O95267 797 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 GP1BAP07359 652 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 HOXC4P09017 264 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-203ENST00000459756 CA4P22748 312 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 KELP23276 732 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 TRIM23P36406 574 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 HK3P52790 923 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 KIAA1024LP59773 190 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 DSC2Q02487 901 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 CAMK2BQ13554 666 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 PDK1Q15118 436 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 ALG11Q2TAA5 492 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 DEFB133Q30KQ1 61 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 HES3Q5TGS1 186 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 ESRP1Q6NXG1 681 aaKnown RBP16.15■□□□□ 0.18
COL7A1-203ENST00000459756 ENPP7Q6UWV6 458 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 MARCH9Q86YJ5 346 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 HID1Q8IV36 788 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 CACTIN-AS1Q8N1I8 211 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 CBARPQ8N350 705 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-203ENST00000459756 PDCD7Q8N8D1 485 aaKnown RBP16.15■□□□□ 0.18
COL7A1-203ENST00000459756 PIH1D2Q8WWB5 315 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 CCDC86Q9H6F5 360 aaKnown RBP16.15■□□□□ 0.18
COL7A1-203ENST00000459756 KLQ9UEF7 1012 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 HYOU1Q9Y4L1 999 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 U3KQA8 63 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 KNTC1P50748 2209 aa16.15■□□□□ 0.18
COL7A1-203ENST00000459756 A0A0A6YYK5 440 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 TRABD2BA6NFA1 517 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 NPIPB15A6NHN6 443 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 CACNB4O00305 520 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 PSTPIP1O43586 416 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 HLA-DQB2P05538 268 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 ANXA6P08133 673 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 PDHA1P08559 390 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 TNNT1P13805 278 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 CTSEP14091 401 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 TSHRP16473 764 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 LHCGRP22888 699 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 SRP54P61011 504 aaKnown RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 RPL26P61254 145 aaKnown RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 IFI35P80217 286 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 INSM1Q01101 510 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 C1orf61Q13536 156 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 ARHGEF7Q14155 803 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 ELOCQ15369 112 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 PNCKQ6P2M8 343 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 TMTC1Q8IUR5 882 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 SDR16C5Q8N3Y7 309 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 ARRDC2Q8TBH0 407 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 LRRN4Q8WUT4 740 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 GLMNQ92990 594 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 TSACCQ96A04 125 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 FUBP1Q96AE4 644 aaKnown RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 RNF25Q96BH1 459 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 NUS1Q96E22 293 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 DTD2Q96FN9 168 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 LGMNQ99538 433 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 BOCQ9BWV1 1114 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 BRD8Q9H0E9 1235 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 WDR26Q9H7D7 661 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 DKK4Q9UBT3 224 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 RPL26L1Q9UNX3 145 aaKnown RBP16.14■□□□□ 0.17
COL7A1-203ENST00000459756 ALG6Q9Y672 507 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 DGKBQ9Y6T7 804 aa16.14■□□□□ 0.17
COL7A1-203ENST00000459756 LRP4O75096 1905 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 KCNK1O00180 336 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 PDE2AO00408 941 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-203ENST00000459756 TNFRSF10CO14798 259 aa16.13■□□□□ 0.17
COL7A1-203ENST00000459756 PPP1R12AO14974 1030 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-203ENST00000459756 IPO7O95373 1038 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms