RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 DOCK9Q9BZ29 2069 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 F5P12259 2224 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 RGS16O15492 202 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 OPA1O60313 960 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 LEFTY1O75610 366 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 RFPL1O75677 317 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 KAT7O95251 611 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 EGFP01133 1207 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 EPOP01588 193 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 GSTA2P09210 222 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 C1SP09871 688 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 TIMP2P16035 220 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 PSMA3P25788 255 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 STX2P32856 288 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 HNF1BP35680 557 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 CSRP3P50461 194 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SEC13P55735 322 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SARNPP82979 210 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 XIAPP98170 497 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 TIAL1Q01085 375 aaKnown RBP eCLIP8.76□□□□□ -1.01
RIF1-208ENST00000457745 RALGDSQ12967 914 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 FRG1Q14331 258 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 ITPRIPL2Q3MIP1 535 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 PPM1JQ5JR12 505 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 KIAA0930Q6ICG6 404 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 CNSTQ6PJW8 725 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 CRTC1Q6UUV9 634 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 KDM7AQ6ZMT4 941 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 PARS2Q7L3T8 475 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 CMC1Q7Z7K0 106 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 CACUL1Q86Y37 369 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SRRM1Q8IYB3 904 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 PIANPQ8IYJ0 282 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 BBS5Q8N3I7 341 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SLC44A3Q8N4M1 653 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 CPA6Q8N4T0 437 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 PCDH20Q8N6Y1 951 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 PPHLN1Q8NEY8 458 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 OR4K2Q8NGD2 314 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 WFIKKN2Q8TEU8 576 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 HDAC10Q969S8 669 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 ISG20Q96AZ6 181 aaKnown RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 RMDN1Q96DB5 314 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 KLHL32Q96NJ5 620 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 CYTH2Q99418 400 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 GAS2L1Q99501 681 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 ROPN1BQ9BZX4 212 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 CEP44Q9C0F1 390 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SLC6A17Q9H1V8 727 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 TMEM245Q9H330 911 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 FAM96AQ9H5X1 160 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 ROPN1Q9HAT0 212 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 KCNK12Q9HB15 430 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 FBXO6Q9NRD1 293 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 HEBP1Q9NRV9 189 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 C20orf96Q9NUD7 363 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.76□□□□□ -1.01
RIF1-208ENST00000457745 SAMD15Q9P1V8 674 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SLC17A7Q9P2U7 560 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 PSMC3IPQ9P2W1 217 aaPredicted RBP8.76□□□□□ -1.01
RIF1-208ENST00000457745 DEC1Q9P2X7 70 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SLC24A2Q9UI40 661 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 SLC25A13Q9UJS0 675 aa8.76□□□□□ -1.01
RIF1-208ENST00000457745 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 A0A0J9YYE9 177 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 TSPAN11A1L157 253 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 HEATR9A2RTY3 570 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 GOLGA6CA6NDK9 693 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CAPN8A6NHC0 703 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ANKRD66B4E2M5 251 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 SPECC1L-ADORA2AF8WAN1 911 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ADAM23O75077 832 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CDH16O75309 829 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 SPAG6O75602 509 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CLDN7O95471 211 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 GOT2P00505 430 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 TRBC1P01850 177 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ALDOAP04075 364 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 POLBP06746 335 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 GOLGA6DP0CG33 693 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ALADP13716 330 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 FOSL2P15408 326 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 NR1D1P20393 614 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 FOXN2P32314 431 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CTHP32929 405 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 PHBP35232 272 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 CCNFP41002 786 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 MSH2P43246 934 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 KIR2DL1P43626 348 aaPredicted RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
RIF1-208ENST00000457745 IRF9Q00978 393 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 GUCY1A3Q02108 690 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 BCL2L1Q07817 233 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 SLC20A2Q08357 652 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 PEX6Q13608 980 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 ZNF460Q14592 562 aa8.75□□□□□ -1.01
RIF1-208ENST00000457745 GRM3Q14832 879 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms