RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 PCDHGC4Q9Y5F7 938 aa11.95□□□□□ -0.5
LINC01287-203ENST00000454441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC01287-203ENST00000454441 LOC400499M0QZD8 3231 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 A0A1W2PQ67 120 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 HTRA2O43464 458 aaPredicted RBP11.94□□□□□ -0.5
LINC01287-203ENST00000454441 TNFP01375 233 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 MPOP05164 745 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 CD48P09326 243 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
LINC01287-203ENST00000454441 CR2P20023 1033 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 NFKBIAP25963 317 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 ITPKBP27987 946 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 MMP13P45452 471 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 KIAA1024LP59773 190 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 GABREP78334 506 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 ACOX1Q15067 660 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 MARC1Q5VT66 337 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 DENND2CQ68D51 928 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 RBM44Q6ZP01 1051 aaKnown RBP11.94□□□□□ -0.5
LINC01287-203ENST00000454441 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 ARL10Q8N8L6 244 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 OR56A4Q8NGH8 313 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 TPCN2Q8NHX9 752 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 FUBP1Q96AE4 644 aaKnown RBP11.94□□□□□ -0.5
LINC01287-203ENST00000454441 CRELD1Q96HD1 420 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
LINC01287-203ENST00000454441 NOD2Q9HC29 1040 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 CTTNBP2NLQ9P2B4 639 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 RCOR3Q9P2K3 495 aaPredicted RBP11.94□□□□□ -0.5
LINC01287-203ENST00000454441 GULP1Q9UBP9 304 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 PADI4Q9UM07 663 aa11.94□□□□□ -0.5
LINC01287-203ENST00000454441 UNC13CQ8NB66 2214 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 TMEM202A6NGA9 273 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 MFSD11O43934 449 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 TCEA3O75764 348 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 CYP2A6P11509 494 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-203ENST00000454441 GM2AP17900 193 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 KELP23276 732 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 VIPR1P32241 457 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 TRAF2Q12933 501 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 CNGA3Q16281 694 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 ISXQ2M1V0 245 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 C3orf38Q5JPI3 329 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 RALGPS1Q5JS13 557 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 LVRNQ6Q4G3 990 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 LSMEM2Q8N112 164 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 SDR16C5Q8N3Y7 309 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 KYQ8NBH2 561 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 CTNNBL1Q8WYA6 563 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-203ENST00000454441 NUS1Q96E22 293 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 CCDC3Q9BQI4 270 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 DEF6Q9H4E7 631 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 WDR26Q9H7D7 661 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 POLR1BQ9H9Y6 1135 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 NT5MQ9NPB1 228 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 MRPL40Q9NQ50 206 aaKnown RBP11.93□□□□□ -0.5
LINC01287-203ENST00000454441 UVRAGQ9P2Y5 699 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 PHTF1Q9UMS5 762 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 GPR34Q9UPC5 381 aa11.93□□□□□ -0.5
LINC01287-203ENST00000454441 ZFC3H1O60293 1989 aaKnown RBP11.92□□□□□ -0.5
LINC01287-203ENST00000454441 SMG1Q96Q15 3661 aaKnown RBP11.92□□□□□ -0.5
LINC01287-203ENST00000454441 GOLGA6CA6NDK9 693 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 GOLGA6BA6NDN3 693 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 HEXIM1O94992 359 aaKnown RBP11.92□□□□□ -0.5
LINC01287-203ENST00000454441 H2AFZP0C0S5 128 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 GOLGA6DP0CG33 693 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 IL4RP24394 825 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 GARSP41250 739 aaKnown RBP11.92□□□□□ -0.5
LINC01287-203ENST00000454441 LSSP48449 732 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 PCBP4P57723 403 aaKnown RBP11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ITKQ08881 620 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 CCDC173Q0VFZ6 552 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ARHGEF7Q14155 803 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 SPIDRQ14159 915 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 DPYSL3Q14195 570 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 SLC18A3Q16572 532 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ATP13A4Q4VNC1 1196 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ZFYVE27Q5T4F4 411 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ARMC12Q5T9G4 340 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 KCTD16Q68DU8 428 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 NCBP2-AS2Q69YL0 99 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 PNCKQ6P2M8 343 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 H2AFVQ71UI9 128 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 CPNE8Q86YQ8 564 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 LRRC49Q8IUZ0 686 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 PELI3Q8N2H9 469 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 KCTD6Q8NC69 237 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 WDR48Q8TAF3 677 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 FAM71BQ8TC56 605 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 OR1E3Q8WZA6 343 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ATXN7L3BQ96GX2 97 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 COQ10AQ96MF6 247 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ZNF578Q96N58 590 aaPredicted RBP11.92□□□□□ -0.5
LINC01287-203ENST00000454441 RBM15Q96T37 977 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC01287-203ENST00000454441 LGMNQ99538 433 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 ZNF670Q9BS34 389 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 LGR4Q9BXB1 951 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 PACSIN1Q9BY11 444 aa11.92□□□□□ -0.5
LINC01287-203ENST00000454441 CYP4F12Q9HCS2 524 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms