RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ARHGAP26Q9UNA1 814 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CCDC195A0A1B0GUA6 201 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 A0A1W2PRU2 124 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CTSLP07711 333 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 SERPINB3P29508 390 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GKP32189 559 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 BMPR1AP36894 532 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GBX1Q14549 363 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 SLC9B1Q4ZJI4 515 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 RNF219Q5W0B1 726 aaPredicted RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 RNF111Q6ZNA4 994 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 SLC25A41Q8N5S1 370 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 LKAAEAR1Q8TD35 194 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 TBATAQ96M53 351 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GATA5Q9BWX5 397 aaPredicted RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 POLR1EQ9GZS1 481 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 NEMP2A6NFY4 417 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 GRXCR1A8MXD5 290 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 PSMD3O43242 534 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 STK10O94804 968 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 KLHL2O95198 593 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 GLP2RO95838 553 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 CD1DP15813 335 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 CD9P21926 228 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 LHCGRP22888 699 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 CLCN7P51798 805 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 STC1P52823 247 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 C1QTNF8P60827 252 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 SKIV2LQ15477 1246 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 PPP1R3AQ16821 1122 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ANO4Q32M45 955 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 LRRC8EQ6NSJ5 796 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 C8orf82Q6P1X6 216 aaPredicted RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 FIBINQ8TAL6 211 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 BRSK1Q8TDC3 778 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 PABPC5Q96DU9 382 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 LYSMD1Q96S90 227 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 SMPD4Q9NXE4 827 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 NKIRAS1Q9NYS0 192 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 BFARQ9NZS9 450 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ZDHHC2Q9UIJ5 367 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 FBXO5Q9UKT4 447 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 FCF1Q9Y324 198 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 FAM95CA0A1B0GW59 222 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 PPP6CO00743 305 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 BUD23O43709 281 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 OR1I1O60431 355 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 MPOP05164 745 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 CSNK1DP48730 415 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 POLD2P49005 469 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 RAB10P61026 200 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 NTHL1P78549 312 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ATXN7L2Q5T6C5 722 aaPredicted RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 ZNF470Q6ECI4 717 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 KIAA0408Q6ZU52 694 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 DCAF4L2Q8NA75 395 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 HDAC10Q969S8 669 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 E2F7Q96AV8 911 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ERP27Q96DN0 273 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 MRPL17Q9NRX2 175 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 IL17CQ9P0M4 197 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 DCDC2Q9UHG0 476 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 HS3ST2Q9Y278 367 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 PCDHGC4Q9Y5F7 938 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 MATN2O00339 956 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 SORBS2O94875 1100 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 C8AP07357 584 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ATP2A2P16615 1042 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 HOXA9P31269 272 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 AVPR1AP37288 418 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ADARP55265 1226 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 DNAJB13P59910 316 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 SARNPP82979 210 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 SMAD3P84022 425 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 CDKN2AIPNLQ96HQ2 116 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 CABS1Q96KC9 395 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ZNF512Q96ME7 567 aaPredicted RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 C19orf43Q9BQ61 176 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 CADM1Q9BY67 442 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 DRC3Q9H069 523 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 KCNK4Q9NYG8 393 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 OAS3Q9Y6K5 1087 aaKnown RBP6.6□□□□□ -1.35
USP46-202ENST00000451218 USH1CQ9Y6N9 552 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 ANKRD12Q6UB98 2062 aa6.6□□□□□ -1.35
USP46-202ENST00000451218 HEATR9A2RTY3 570 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 TMEM233B4DJY2 109 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 C10orf142B7Z368 130 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 TBL1XO60907 577 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 EFCAB14O75071 495 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 IRF1P10914 325 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 MYL2P10916 166 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 ZNF37AP17032 561 aaPredicted RBP6.59□□□□□ -1.35
USP46-202ENST00000451218 TARSP26639 723 aaKnown RBP6.59□□□□□ -1.35
USP46-202ENST00000451218 WEE1P30291 646 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 DPP6P42658 865 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 STK19P49842 368 aaPredicted RBP6.59□□□□□ -1.35
USP46-202ENST00000451218 PTK2BQ14289 1009 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 KRT72Q14CN4 511 aa6.59□□□□□ -1.35
USP46-202ENST00000451218 NAIF1Q69YI7 327 aaPredicted RBP6.59□□□□□ -1.35
USP46-202ENST00000451218 AFTPHQ6ULP2 937 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms