RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 VOPP1Q96AW1 172 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 PRRC2BQ5JSZ5 2229 aaKnown RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 A0A096LPK6 155 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 OR51F1A6NGY5 319 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 CD3EAPO15446 510 aaKnown RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 POP4O95707 220 aaKnown RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 C2P06681 752 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 ARSAP15289 507 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 GKP32189 559 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 DMTNQ08495 405 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 USP10Q14694 798 aaKnown RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 GKAP1Q5VSY0 366 aaPredicted RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 ETFBKMTQ8IXQ9 262 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 ZNF75CPQ92670 426 aaPredicted RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 ZFYVE19Q96K21 471 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 EBF3Q9H4W6 596 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 ZFP14Q9HCL3 533 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 CLEC1BQ9P126 229 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 MARCH4Q9P2E8 410 aaPredicted RBP14.29□□□□□ -0.12
USP39-207ENST00000450066 MYO9BQ13459 2157 aa14.29□□□□□ -0.12
USP39-207ENST00000450066 A0A0J9YYE9 177 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 FAM95CA0A1B0GW59 222 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 TULP3O75386 442 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 S1PR4O95977 384 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 TOP3BO95985 862 aaKnown RBP14.28□□□□□ -0.12
USP39-207ENST00000450066 TRBC1P01850 177 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 NNMTP40261 264 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 CLCN5P51795 746 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 CCNHP51946 323 aaPredicted RBP14.28□□□□□ -0.12
USP39-207ENST00000450066 POU4F1Q01851 419 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 RAD51Q06609 339 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 TANGO2Q6ICL3 276 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 CES5AQ6NT32 575 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 CNSTQ6PJW8 725 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 AFTPHQ6ULP2 937 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 DPY19L3Q6ZPD9 716 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 MICALCLQ6ZW33 695 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 PIGWQ7Z7B1 504 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 SDCCAG8Q86SQ7 713 aaPredicted RBP14.28□□□□□ -0.12
USP39-207ENST00000450066 LCA5Q86VQ0 697 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 MFSD6LQ8IWD5 586 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 ARMC2Q8NEN0 867 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 SCG3Q8WXD2 468 aaKnown RBP14.28□□□□□ -0.12
USP39-207ENST00000450066 ECHDC3Q96DC8 303 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 MRGPRX3Q96LB0 322 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 ZNF641Q96N77 438 aaPredicted RBP14.28□□□□□ -0.12
USP39-207ENST00000450066 ZNF576Q9H609 170 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 CATSPERZQ9NTU4 200 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 FGFR1OP2Q9NVK5 253 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 LMCD1Q9NZU5 365 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 TLK1Q9UKI8 766 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 ANKRD6Q9Y2G4 727 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 ZNF711Q9Y462 761 aa14.28□□□□□ -0.12
USP39-207ENST00000450066 WDR91A4D1P6 747 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 BIRC5O15392 142 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 STX7O15400 261 aaKnown RBP14.27□□□□□ -0.12
USP39-207ENST00000450066 ASLP04424 464 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.12
USP39-207ENST00000450066 OGNP20774 298 aaKnown RBP14.27□□□□□ -0.12
USP39-207ENST00000450066 CRABP2P29373 138 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 HMGCLP35914 325 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 RAB10P61026 200 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 FCHO2Q0JRZ9 810 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 ZKSCAN8Q15776 578 aaPredicted RBP14.27□□□□□ -0.12
USP39-207ENST00000450066 ZNF789Q5FWF6 425 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 N4BP2L1Q5TBK1 243 aaPredicted RBP14.27□□□□□ -0.12
USP39-207ENST00000450066 C12orf40Q86WS4 652 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 C19orf43Q9BQ61 176 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 S1PR5Q9H228 398 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 SUV39H2Q9H5I1 410 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 MANSC1Q9H8J5 431 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 ECT2Q9H8V3 914 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 POLR3BQ9NW08 1133 aaPredicted RBP14.27□□□□□ -0.12
USP39-207ENST00000450066 EMCNQ9ULC0 261 aa14.27□□□□□ -0.12
USP39-207ENST00000450066 OTOL1A6NHN0 477 aaPredicted RBP14.27□□□□□ -0.13
USP39-207ENST00000450066 WASH3PC4AMC7 463 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 H7C0S8 307 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 PLIN3O60664 434 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 SRPRAP08240 638 aaKnown RBP14.27□□□□□ -0.13
USP39-207ENST00000450066 DLDP09622 509 aaKnown RBP14.27□□□□□ -0.13
USP39-207ENST00000450066 ALPIP09923 528 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 STMN1P16949 149 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 CTPS1P17812 591 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 PTPRRQ15256 657 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 TYSND1Q2T9J0 566 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 GAB4Q2WGN9 574 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 CCDC153Q494R4 210 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 TAF1BQ53T94 588 aaPredicted RBP14.27□□□□□ -0.13
USP39-207ENST00000450066 VITQ6UXI7 678 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 Q6ZVU0 165 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 RAPH1Q70E73 1250 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 SLC41A1Q8IVJ1 513 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 PAF1Q8N7H5 531 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 GPATCH11Q8N954 259 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 OR2A12Q8NGT7 310 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 FRS2Q8WU20 508 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 CYB5D2Q8WUJ1 264 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms