RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 C22orf39Q6P5X5 142 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 ENPP7Q6UWV6 458 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 PARS2Q7L3T8 475 aaKnown RBP7.94□□□□□ -1.14
LINC01961-201ENST00000449954 SLC47A2Q86VL8 602 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 CCDC65Q8IXS2 484 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 CHST14Q8NCH0 376 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 PARD3BQ8TEW8 1205 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 UBE2Q2Q8WVN8 375 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 SLC39A13Q96H72 371 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 BTN2A3PQ96KV6 586 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 CTRCQ99895 268 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 GSX2Q9BZM3 304 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 ULBP3Q9BZM4 244 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 NIF3L1Q9GZT8 377 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 TMEM63CQ9P1W3 806 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 CGNQ9P2M7 1197 aaKnown RBP7.94□□□□□ -1.14
LINC01961-201ENST00000449954 DMGDHQ9UI17 866 aaKnown RBP7.94□□□□□ -1.14
LINC01961-201ENST00000449954 CSPG4Q6UVK1 2322 aa7.94□□□□□ -1.14
LINC01961-201ENST00000449954 A0A1B0GUH1 482 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 C21orf140B9A014 251 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 RNF103O00237 685 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 POLR1CO15160 346 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 TGFB1I1O43294 461 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 KATNA1O75449 491 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 CEACAM4O75871 244 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 TM7SF2O76062 418 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 ALBP02768 609 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 LTFP02788 710 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 EPB42P16452 691 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 CSF2RBP32927 897 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 IDH3AP50213 366 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 ANAPC15P60006 121 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 ADAM9Q13443 819 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 BIRC2Q13490 618 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 VWA2Q5GFL6 755 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 CPZQ66K79 652 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 TMEM71Q6P5X7 295 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 C6orf15Q6UXA7 325 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 BNC2Q6ZN30 1099 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 DPY19L3Q6ZPD9 716 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 C8orf86Q6ZUL3 223 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 C17orf82Q86X59 251 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 CIR1Q86X95 450 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 C12orf56Q8IXR9 622 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 RBMXL3Q8N7X1 1067 aaKnown RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 TP53I13Q8NBR0 393 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 STAMBPL1Q96FJ0 436 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 PDXPQ96GD0 296 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 WDR92Q96MX6 357 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 BARD1Q99728 777 aaKnown RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 ING2Q9H160 280 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 AGPAT4Q9NRZ5 378 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 PDP2Q9P2J9 529 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 HESX1Q9UBX0 185 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 CCDC39Q9UFE4 941 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 OR51B4Q9Y5P0 310 aa7.93□□□□□ -1.14
LINC01961-201ENST00000449954 MN1Q10571 1320 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
LINC01961-201ENST00000449954 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 IGHV1OR21-1A0A087WYE8 117 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 CLIC2O15247 247 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 EXOC3O60645 756 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 PRMT3O60678 531 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 MT-CO1P00395 513 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 SETSIPP0DME0 302 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 RRM1P23921 792 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 HOXD13P35453 343 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 GARSP41250 739 aaKnown RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 CCL11P51671 97 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 MAZP56270 477 aaKnown RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 FOXM1Q08050 763 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 IRF4Q15306 451 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 UGT8Q16880 541 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 ZNF630Q2M218 657 aaPredicted RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 GOLGA7BQ2TAP0 167 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 ZNF394Q53GI3 561 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 MIIPQ5JXC2 388 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 CD163Q86VB7 1156 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 IRF2BP1Q8IU81 584 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 SFTPA2Q8IWL1 248 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 CISD2Q8N5K1 135 aaKnown RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 DCAF4L2Q8NA75 395 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 PLEKHO2Q8TD55 490 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 DQX1Q8TE96 717 aaKnown RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 C14orf79Q96F83 325 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 FAXDC2Q96IV6 333 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 HEPHQ9BQS7 1158 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 BACH2Q9BYV9 841 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 CEP44Q9C0F1 390 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 MUC3BQ9H195 1237 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 APMAPQ9HDC9 416 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 MBNL1Q9NR56 388 aaKnown RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 USP25Q9UHP3 1055 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 XPO7Q9UIA9 1087 aaKnown RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 ITM2BQ9Y287 266 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 B3GNT3Q9Y2A9 372 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 COPG1Q9Y678 874 aaKnown RBP7.92□□□□□ -1.14
LINC01961-201ENST00000449954 COL6A5A8TX70 2615 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 ATRQ13535 2644 aa7.92□□□□□ -1.14
LINC01961-201ENST00000449954 JMJD1CQ15652 2540 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms