RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 COL6A2P12110 1019 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TYMPP19971 482 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 RPL5P46777 297 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 GALK1P51570 392 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 HK2P52789 917 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 AQP4P55087 323 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TAS2R39P59534 338 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 PRKG2Q13237 762 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TIGD2Q4W5G0 525 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 PITRM1Q5JRX3 1037 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TMEM198Q66K66 360 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 GPRIN3Q6ZVF9 776 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 SATL1Q86VE3 508 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 FSTL5Q8N475 847 aaPredicted RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 ZNF276Q8N554 614 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 UTP15Q8TED0 518 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 TPD52L3Q96J77 140 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CAMKK2Q96RR4 588 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 EPB41L4BQ9H329 900 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 FAM124BQ9H5Z6 455 aaPredicted RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 CLCA2Q9UQC9 943 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 MYH3P11055 1940 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 SHANK3Q9BYB0 1731 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CICQ96RK0 1608 aaPredicted RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 RGS5O15539 181 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ITM2AO43736 263 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CAPN15O75808 1086 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 MLYCDO95822 493 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 HSMCR30P0CW71 290 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 PRKAR2AP13861 404 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 UQCRBP14927 111 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CYP3A5P20815 502 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CCNCP24863 283 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TKTP29401 623 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 SERPINA4P29622 427 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 SERPINB1P30740 379 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 IDH3AP50213 366 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 MRPS15P82914 257 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 SMAD3P84022 425 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 ACSM2AQ08AH3 577 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CNTN1Q12860 1018 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 MAPK11Q15759 364 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 MAPKAPK3Q16644 382 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 LSM12Q3MHD2 195 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 DEPDC1Q5TB30 811 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ACSM2BQ68CK6 577 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TRMT11Q7Z4G4 463 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 OR4K2Q8NGD2 314 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ITFG2Q969R8 447 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 LINGO1Q96FE5 620 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TEKT5Q96M29 485 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 FAM210AQ96ND0 272 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 BCO2Q9BYV7 579 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 DNAJC28Q9NX36 388 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 FBXW11Q9UKB1 542 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TMCC3Q9ULS5 477 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 PCDHB12Q9Y5F1 795 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 URB1O60287 2271 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 DHRS12A0PJE2 317 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 KCNU1A8MYU2 1149 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ZBTB14O43829 449 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TBL1XO60907 577 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ULK1O75385 1050 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 RGS20O76081 388 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ATG7O95352 703 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 NTRK1P04629 796 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ANXA5P08758 320 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CKBP12277 381 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 NR4A1P22736 598 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 GRK4P32298 578 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 OR1D2P34982 312 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CHRNA4P43681 627 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CXCR3P49682 368 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CCL23P55773 120 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 ATP6V0D1P61421 351 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 RPL38P63173 70 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 IRF8Q02556 426 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TCEAL1Q15170 157 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 SLC44A4Q53GD3 710 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 RAB6CQ53S08 254 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 SH3D19Q5HYK7 790 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 CLEC6AQ6EIG7 209 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 BNIPLQ7Z465 357 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 KIAA2013Q8IYS2 634 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 DCBLD1Q8N8Z6 715 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 OR6K2Q8NGY2 324 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 SLC9A7Q96T83 725 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TRMOQ9BU70 441 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 RAB6CQ9H0N0 254 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 MTIF3Q9H2K0 278 aaKnown RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 RIBC2Q9H4K1 309 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TMEM165Q9HC07 324 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 H2AFY2Q9P0M6 372 aaPredicted RBP7.17□□□□□ -1.26
BEST1-202ENST00000449131 PRKAG3Q9UGI9 489 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 LNPEPQ9UIQ6 1025 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TCAF1Q9Y4C2 921 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 TEX264Q9Y6I9 313 aa7.17□□□□□ -1.26
BEST1-202ENST00000449131 AKAP11Q9UKA4 1901 aa7.16□□□□□ -1.26
BEST1-202ENST00000449131 A0A0J9YYE9 177 aa7.16□□□□□ -1.26
BEST1-202ENST00000449131 FAM149AA5PLN7 773 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms