RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PEX26Q7Z412 305 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 IQCHQ86VS3 1027 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 RCOR2Q8IZ40 523 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 DENND6BQ8NEG7 585 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 FATE1Q969F0 183 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 ECHDC3Q96DC8 303 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 KLHDC7BQ96G42 594 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 OLFM3Q96PB7 478 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 C1QTNF7Q9BXJ2 289 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 CEP41Q9BYV8 373 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 AMACRQ9UHK6 382 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 AMFRQ9UKV5 643 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 PCDHGA1Q9Y5H4 931 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 CAPN6Q9Y6Q1 641 aa14.65□□□□□ -0.06
USP39-206ENST00000448971 TP53BP1Q12888 1972 aaPredicted RBP14.65□□□□□ -0.06
USP39-206ENST00000448971 MYLKQ15746 1914 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 COL5A1P20908 1838 aaPredicted RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 TRAFD1O14545 582 aaPredicted RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 FPGTO14772 594 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 KRT86O43790 486 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 FTCDO95954 541 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 PTMAP06454 111 aaKnown RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 C6P13671 934 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 PECAM1P16284 738 aaPredicted RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 CA4P22748 312 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 CETN2P41208 172 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 ARRB1P49407 418 aaPredicted RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 IFI35P80217 286 aaPredicted RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 SEMG2Q02383 582 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 ZBTB17Q13105 803 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 SHBQ15464 509 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 TMEM52BQ4KMG9 183 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 CCDC157Q569K6 752 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 ARMC12Q5T9G4 340 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 KYAT3Q6YP21 454 aaKnown RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 OXR1Q8N573 874 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 LRRC57Q8N9N7 239 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 OR13H1Q8NG92 308 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 P3H4Q92791 437 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 ELF4Q99607 663 aaPredicted RBP14.64□□□□□ -0.07
USP39-206ENST00000448971 FTSJ1Q9UET6 329 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 GUCA1BQ9UMX6 200 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 COQ6Q9Y2Z9 468 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 PCDHA3Q9Y5H8 950 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 ADGRG1Q9Y653 693 aa14.64□□□□□ -0.07
USP39-206ENST00000448971 ANKRD36A6QL64 1941 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 DOCK9Q9BZ29 2069 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 RAD51BO15315 384 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 HTRA2O43464 458 aaPredicted RBP14.63□□□□□ -0.07
USP39-206ENST00000448971 LZTS3O60299 673 aaPredicted RBP14.63□□□□□ -0.07
USP39-206ENST00000448971 JCHAINP01591 159 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 CCDC175P0C221 793 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 ELFN1P0C7U0 828 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 ITPKBP27987 946 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 NR2C2P49116 596 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 EPHB1P54762 984 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 DSG2Q14126 1118 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 TAZQ16635 292 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 INAVAQ3KP66 663 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 B4GALNT4Q76KP1 1039 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 NT5DC3Q86UY8 548 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 GATAD2AQ86YP4 633 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 LRRC8AQ8IWT6 810 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 UBL4BQ8N7F7 174 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 SAP25Q8TEE9 199 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 TFB1MQ8WVM0 346 aaKnown RBP14.63□□□□□ -0.07
USP39-206ENST00000448971 NSMCE3Q96MG7 304 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 C1QTNF2Q9BXJ5 285 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 HEMGNQ9BXL5 484 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 BRD8Q9H0E9 1235 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 SAE1Q9UBE0 346 aaPredicted RBP14.63□□□□□ -0.07
USP39-206ENST00000448971 B4GALT6Q9UBX8 382 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 PACSIN2Q9UNF0 486 aaPredicted RBP14.63□□□□□ -0.07
USP39-206ENST00000448971 RAI2Q9Y5P3 530 aa14.63□□□□□ -0.07
USP39-206ENST00000448971 ATMQ13315 3056 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 EIF4E1BA6NMX2 242 aaKnown RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 A8MX80 341 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 MIF4GDA9UHW6 222 aaKnown RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 ENC1O14682 589 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 YKT6O15498 198 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 PGLSO95336 258 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 CYP2A6P11509 494 aaPredicted RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 IGFALSP35858 605 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 EIF2S3P41091 472 aaKnown RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 LIG3P49916 1009 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 CLDN6P56747 220 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 COPS2P61201 443 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 CCZ1BP86790 482 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 CCZ1P86791 482 aaPredicted RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 ADCY2Q08462 1091 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 RALGDSQ12967 914 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 ALG1LQ6GMV1 187 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 BBS12Q6ZW61 710 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 USP45Q70EL2 814 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 DPPA4Q7L190 304 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 ABI3BPQ7Z7G0 1075 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 ZC3H18Q86VM9 953 aaKnown RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 SPATS2Q86XZ4 545 aaKnown RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 FAM174AQ8TBP5 190 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 ASB12Q8WXK4 309 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms