RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RPIAP49247 311 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 UCNP55089 124 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 PFN3P60673 137 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 YPEL5P62699 121 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 DYNLT1P63172 113 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 GABREP78334 506 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 DPYSQ14117 519 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 PDK2Q15119 407 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 ANKRD20A8PQ5CZ79 823 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 IGF2-ASQ6U949 168 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 TTC7BQ86TV6 843 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 NLRP14Q86W24 1093 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 TP53INP2Q8IXH6 220 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 RCOR2Q8IZ40 523 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 PQLC3Q8N755 202 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 ZNF548Q8NEK5 533 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 PCDH19Q8TAB3 1148 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 CASKIN2Q8WXE0 1202 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 CENPTQ96BT3 561 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 MS4A14Q96JA4 679 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 HIC2Q96JB3 615 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 TBATAQ96M53 351 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 EPAS1Q99814 870 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 C1QTNF7Q9BXJ2 289 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 TM6SF2Q9BZW4 377 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 NDFIP2Q9NV92 336 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 SPASTQ9UBP0 616 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 SNX12Q9UMY4 172 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 U3KQA8 63 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 hCG_1818297A0A087WSY0 165 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 CTAGE9A4FU28 777 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 KRIT1O00522 736 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 CEP104O60308 925 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 MAP3K6O95382 1288 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 MPOP05164 745 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 ERCC2P18074 760 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 ARL4AP40617 200 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 THOP1P52888 689 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 NR0B2Q15466 257 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 TAZQ16635 292 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 ISXQ2M1V0 245 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 ODF2Q5BJF6 829 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 NPWQ8N729 165 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 WDR48Q8TAF3 677 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 LMX1AQ8TE12 382 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 FAF2Q96CS3 445 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 RBM41Q96IZ5 413 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 RNF157Q96PX1 679 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 ZNF670Q9BS34 389 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 DPH1Q9BZG8 443 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 THSD1Q9NS62 852 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 KLF15Q9UIH9 416 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 ACTL7AQ9Y615 435 aa13.86□□□□□ -0.19
PDLIM2-213ENST00000448520 COL6A6A6NMZ7 2263 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 CPED1A4D0V7 1026 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 AREL1O15033 823 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 SPINT1O43278 529 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 DAPK3O43293 454 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 ZNF500O60304 480 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 TCEA3O75764 348 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 TM7SF2O76062 418 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 UGT2B4P06133 528 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 MYF5P13349 255 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 GKP32189 559 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 ABL2P42684 1182 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 SUOXP51687 545 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 TMPRSS3P57727 454 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 CXADRP78310 365 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 EIF2B5Q13144 721 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 CDKN3Q16667 212 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 INO80DQ53TQ3 878 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 PAPD7Q5XG87 772 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 NCBP2-AS2Q69YL0 99 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 NPNTQ6UXI9 565 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 GDPD4Q6W3E5 623 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 OR6K2Q8NGY2 324 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 LRRN4Q8WUT4 740 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 NAT6Q93015 286 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 HAUS1Q96CS2 278 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 CCDC97Q96F63 343 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 WBP1Q96G27 269 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 CELF6Q96J87 481 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 CAPZA3Q96KX2 299 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 KLHL32Q96NJ5 620 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 FAM118BQ9BPY3 351 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 OSBPL8Q9BZF1 889 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 SLC13A1Q9BZW2 595 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 DONSONQ9NYP3 566 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 DKK3Q9UBP4 350 aa13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 HELZ2Q9BYK8 2649 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-213ENST00000448520 UNC13CQ8NB66 2214 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 KIF26BQ2KJY2 2108 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 LMO7DNF2Z398 122 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 MFSD11O43934 449 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 CST8O60676 142 aa13.84□□□□□ -0.19
PDLIM2-213ENST00000448520 PECAM1P16284 738 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms