RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 CXorf40BQ96DE9 158 aa7.43□□□□□ -1.22
SYNE1-213ENST00000448038 MTFMTQ96DP5 389 aaKnown RBP7.43□□□□□ -1.22
SYNE1-213ENST00000448038 AHCYL2Q96HN2 611 aaKnown RBP7.43□□□□□ -1.22
SYNE1-213ENST00000448038 FCRL5Q96RD9 977 aa7.43□□□□□ -1.22
SYNE1-213ENST00000448038 WRAP53Q9BUR4 548 aaKnown RBP7.43□□□□□ -1.22
SYNE1-213ENST00000448038 EIF2B3Q9NR50 452 aaKnown RBP7.43□□□□□ -1.22
SYNE1-213ENST00000448038 GRHL1Q9NZI5 618 aa7.43□□□□□ -1.22
SYNE1-213ENST00000448038 STARD13Q9Y3M8 1113 aa7.43□□□□□ -1.22
SYNE1-213ENST00000448038 LAMB1P07942 1786 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 RGS14O43566 566 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 NRLP54845 237 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SLC10A7Q0GE19 358 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 BST1Q10588 318 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CYP51A1Q16850 503 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CCDC142Q17RM4 750 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 MS4A13Q5J8X5 152 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 TSTD2Q5T7W7 516 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 HECTD2Q5U5R9 776 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 MFSD5Q6N075 450 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 WFIKKN2Q8TEU8 576 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 FEM1CQ96JP0 617 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 DNAJC1Q96KC8 554 aaKnown RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 PEBP4Q96S96 227 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SELENONQ9NZV5 590 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 PRAMEF1O95521 474 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 GDI1P31150 447 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ACVRL1P37023 503 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CACNG1Q06432 222 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 FASTKQ14296 549 aaKnown RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 RAVER1Q8IY67 606 aaKnown RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 BRSK1Q8TDC3 778 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SELENOMQ8WWX9 145 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 EME1Q96AY2 570 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 AP2M1Q96CW1 435 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 NRBF2Q96F24 287 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 FAM83DQ9H4H8 585 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 THEGQ9P2T0 379 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 PCDHB1Q9Y5F3 818 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 F8W810 466 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 VPS4BO75351 444 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CDK14O94921 469 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ASLP04424 464 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 HLA-DQB2P05538 268 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SLC35G4P0C7Q5 338 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 TSPAN8P19075 237 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CHRNA4P43681 627 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ECT2LQ008S8 904 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 FBXW10Q5XX13 1052 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CERS6Q6ZMG9 384 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 PIWIL4Q7Z3Z4 852 aaKnown RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CMTM8Q8IZV2 173 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ZNF599Q96NL3 588 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 NMUR1Q9HB89 426 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CYTH4Q9UIA0 394 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CD84Q9UIB8 345 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 TMEM59LQ9UK28 342 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ASF1AQ9Y294 204 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 WNT6Q9Y6F9 365 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 BRWD3Q6RI45 1802 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SCN9AQ15858 1988 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 J3KR12 359 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 TMEM63AO94886 807 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ANXA11P50995 505 aaKnown RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 MPP1Q00013 466 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 PDK4Q16654 411 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 GPRIN1Q7Z2K8 1008 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ST13P4Q8IZP2 240 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CLEC4FQ8N1N0 589 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 RDH11Q8TC12 318 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 OVCA2Q8WZ82 227 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SAMD11Q96NU1 681 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 PHPT1Q9NRX4 125 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 FNIP2Q9P278 1114 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ANKDD1BA6NHY2 528 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 DCXO43602 365 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SNAP91O60641 907 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 OAZ2O95190 189 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 MLYCDO95822 493 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ADH5P11766 374 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 SCTRP47872 440 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ACSM2AQ08AH3 577 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 LIPMQ5VYY2 423 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ACSM2BQ68CK6 577 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 MBLAC2Q68D91 279 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ARCQ7LC44 396 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ZNF572Q7Z3I7 529 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-213ENST00000448038 BPIFB1Q8TDL5 484 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 KCNK4Q9NYG8 393 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ARMCX1Q9P291 453 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 PADI4Q9UM07 663 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 CNTN6Q9UQ52 1028 aa7.42□□□□□ -1.22
SYNE1-213ENST00000448038 ZSCAN9O15535 394 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-213ENST00000448038 ITGB1P05556 798 aa7.41□□□□□ -1.22
SYNE1-213ENST00000448038 KELP23276 732 aa7.41□□□□□ -1.22
SYNE1-213ENST00000448038 GRSF1Q12849 480 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYNE1-213ENST00000448038 PAFAH1B3Q15102 231 aaKnown RBP7.41□□□□□ -1.22
SYNE1-213ENST00000448038 TRIP10Q15642 601 aa7.41□□□□□ -1.22
SYNE1-213ENST00000448038 PLEKHG4Q58EX7 1191 aa7.41□□□□□ -1.22
SYNE1-213ENST00000448038 SLC9A4Q6AI14 798 aa7.41□□□□□ -1.22
SYNE1-213ENST00000448038 C10orf107Q8IVU9 208 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms