RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 KLHL8Q9P2G9 620 aaPredicted RBP16.43■□□□□ 0.22
SF3A1-204ENST00000447376 SAE1Q9UBE0 346 aaPredicted RBP16.43■□□□□ 0.22
SF3A1-204ENST00000447376 FTSJ1Q9UET6 329 aa16.43■□□□□ 0.22
SF3A1-204ENST00000447376 JRKLQ9Y4A0 524 aa16.43■□□□□ 0.22
SF3A1-204ENST00000447376 TP53BP1Q12888 1972 aaPredicted RBP16.43■□□□□ 0.22
SF3A1-204ENST00000447376 TMEM131Q92545 1883 aa16.43■□□□□ 0.22
SF3A1-204ENST00000447376 SPTY2D1-AS1A0A0U1RR47 76 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 NEMP2A6NFY4 417 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 A8MX80 341 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 GIPC1O14908 333 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 RECQL5O94762 991 aaPredicted RBP16.42■□□□□ 0.22
SF3A1-204ENST00000447376 TRIM16O95361 564 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 PCCBP05166 539 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 ADRB1P08588 477 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 PECAM1P16284 738 aaPredicted RBP16.42■□□□□ 0.22
SF3A1-204ENST00000447376 ZNF30P17039 623 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 IGFALSP35858 605 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 SEMG2Q02383 582 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 ZBTB17Q13105 803 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 XRCC4Q13426 336 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 MTM1Q13496 603 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 PRKD1Q15139 912 aaPredicted RBP16.42■□□□□ 0.22
SF3A1-204ENST00000447376 TEX44Q53QW1 395 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 ZNF569Q5MCW4 686 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 N4BP2L1Q5TBK1 243 aaPredicted RBP16.42■□□□□ 0.22
SF3A1-204ENST00000447376 DBX2Q6ZNG2 339 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 GATAD2AQ86YP4 633 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 CDKL3Q8IVW4 592 aaPredicted RBP16.42■□□□□ 0.22
SF3A1-204ENST00000447376 TP53I13Q8NBR0 393 aaPredicted RBP16.42■□□□□ 0.22
SF3A1-204ENST00000447376 LPCAT1Q8NF37 534 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 SAP25Q8TEE9 199 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 NUS1Q96E22 293 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 SLC25A51Q9H1U9 297 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 CHKBQ9Y259 395 aa16.42■□□□□ 0.22
SF3A1-204ENST00000447376 ASCC3Q8N3C0 2202 aaKnown RBP16.42■□□□□ 0.22
SF3A1-204ENST00000447376 CACNB4O00305 520 aaPredicted RBP16.41■□□□□ 0.22
SF3A1-204ENST00000447376 HEXIM1O94992 359 aaKnown RBP16.41■□□□□ 0.22
SF3A1-204ENST00000447376 CTPS1P17812 591 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 KELP23276 732 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 BLKP51451 505 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 PFN3P60673 137 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 ADCY2Q08462 1091 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 MACC1Q6ZN28 852 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 ARRDC2Q8TBH0 407 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 CCHCR1Q8TD31 782 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 HTR3CQ8WXA8 447 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 CAMK1GQ96NX5 476 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 QKIQ96PU8 341 aaKnown RBP eCLIP16.41■□□□□ 0.22
SF3A1-204ENST00000447376 MCCC1Q96RQ3 725 aaPredicted RBP16.41■□□□□ 0.22
SF3A1-204ENST00000447376 CEP41Q9BYV8 373 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 SLC13A1Q9BZW2 595 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 MBNL1Q9NR56 388 aaKnown RBP16.41■□□□□ 0.22
SF3A1-204ENST00000447376 EVA1BQ9NVM1 165 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 TRHDEQ9UKU6 1024 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 PPIL1Q9Y3C6 166 aa16.41■□□□□ 0.22
SF3A1-204ENST00000447376 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
SF3A1-204ENST00000447376 A0A0J9YYE9 177 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 SPAARA0A1B0GVQ0 90 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 MED19A0JLT2 244 aaPredicted RBP16.4■□□□□ 0.22
SF3A1-204ENST00000447376 GOLGA6CA6NDK9 693 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 GOLGA6BA6NDN3 693 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 PDE2AO00408 941 aaPredicted RBP16.4■□□□□ 0.22
SF3A1-204ENST00000447376 TNFSF14O43557 240 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 FZD6O60353 706 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 SDC3O75056 442 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 TRBC1P01850 177 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 CSF2P04141 144 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 PDHA1P08559 390 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 GOLGA6DP0CG33 693 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 OTUD4Q01804 1114 aaKnown RBP16.4■□□□□ 0.22
SF3A1-204ENST00000447376 NIPAL4Q0D2K0 466 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 RALGDSQ12967 914 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 BNIP3Q12983 259 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 INPP5AQ14642 412 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 NOMO1Q15155 1222 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 SLC14A2Q15849 920 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 CNGA3Q16281 694 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 WSCD2Q2TBF2 565 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 ITPRIPL1Q6GPH6 555 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 AADACL2Q6P093 401 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 PID1Q7Z2X4 250 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 SLC22A18ASQ8N1D0 253 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 EID2Q8N6I1 236 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 CNTD1Q8N815 330 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 ACTL9Q8TC94 416 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 PIH1D2Q8WWB5 315 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 MAIP1Q8WWC4 291 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 LRRC45Q96CN5 670 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 IMP4Q96G21 291 aaKnown RBP16.4■□□□□ 0.22
SF3A1-204ENST00000447376 TEKT5Q96M29 485 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 NSMCE3Q96MG7 304 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 SRPK1Q96SB4 655 aaKnown RBP16.4■□□□□ 0.22
SF3A1-204ENST00000447376 RBM15Q96T37 977 aaKnown RBP eCLIP16.4■□□□□ 0.22
SF3A1-204ENST00000447376 MLPHQ9BV36 600 aaPredicted RBP16.4■□□□□ 0.22
SF3A1-204ENST00000447376 TLR10Q9BXR5 811 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 GLOD4Q9HC38 313 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 GOLGA6AQ9NYA3 693 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 PYCARDQ9ULZ3 195 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 DNAH14Q0VDD8 3507 aa16.4■□□□□ 0.22
SF3A1-204ENST00000447376 DOCK9Q9BZ29 2069 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms