RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TIMP2P16035 220 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 RPL21P46778 160 aaKnown RBP17.3■□□□□ 0.36
LIME1-202ENST00000444951 SHC2P98077 582 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 SIRPB2Q5JXA9 342 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 ANKRD22Q5VYY1 191 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 ERN2Q76MJ5 926 aaKnown RBP17.3■□□□□ 0.36
LIME1-202ENST00000444951 CPT1BQ92523 772 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 SNF8Q96H20 258 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 FEM1CQ96JP0 617 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 SPACA7Q96KW9 195 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 ADGRE3Q9BY15 652 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 RAB17Q9H0T7 212 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 TMEM9BQ9NQ34 198 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 TPX2Q9ULW0 747 aaKnown RBP17.3■□□□□ 0.36
LIME1-202ENST00000444951 CYP8B1Q9UNU6 501 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 NCKAP1Q9Y2A7 1128 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 WDFY3Q8IZQ1 3526 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 DNALI1O14645 258 aaPredicted RBP17.29■□□□□ 0.36
LIME1-202ENST00000444951 MAP3K13O43283 966 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 NDST3O95803 873 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 ALPIP09923 528 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 PIRTP0C851 137 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 ITPKAP23677 461 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 DRD3P35462 400 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 GRIA1P42261 906 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 TPMTP51580 245 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 NEK3P51956 506 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 POLR2LP62875 67 aaKnown RBP17.29■□□□□ 0.36
LIME1-202ENST00000444951 FAM193AP78312 1265 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 GUCY2DQ02846 1103 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 MTM1Q13496 603 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 KCNJ11Q14654 390 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 SLC14A2Q15849 920 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 TRIM61Q5EBN2 209 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 KCTD11Q693B1 232 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 BRAT1Q6PJG6 821 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 PPIL6Q8IXY8 311 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 DNAAF3Q8N9W5 541 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 ECHDC3Q96DC8 303 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 NEUROG2Q9H2A3 272 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 DKK3Q9UBP4 350 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 ITM2BQ9Y287 266 aa17.29■□□□□ 0.36
LIME1-202ENST00000444951 SPEGQ15772 3267 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 A0A0U1RQS6 177 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 FAM47DPA6NHR8 397 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 UPK3BL1B0FP48 263 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 UPK3BL2E5RIL1 263 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 NEMP1O14524 444 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 FZD6O60353 706 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 TOP3BO95985 862 aaKnown RBP17.28■□□□□ 0.36
LIME1-202ENST00000444951 ADRB3P13945 408 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 TPH1P17752 444 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 IVDP26440 423 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 ADRA1AP35348 466 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 ABL2P42684 1182 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 ITGA8P53708 1063 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 ZBTB16Q05516 673 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 TRADDQ15628 312 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 SLC1A5Q15758 541 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 QPCTQ16769 361 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 UGP2Q16851 508 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 UAP1L1Q3KQV9 507 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
LIME1-202ENST00000444951 LYSMD4Q5XG99 296 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 NAPEPLDQ6IQ20 393 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 SYT12Q8IV01 421 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 OR52K1Q8NGK4 314 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 OR14C36Q8NHC7 312 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 PIH1D2Q8WWB5 315 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 HDAC8Q9BY41 377 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 PCDH12Q9NPG4 1184 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIME1-202ENST00000444951 DMGDHQ9UI17 866 aaKnown RBP17.28■□□□□ 0.36
LIME1-202ENST00000444951 GGT7Q9UJ14 662 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 PHTF1Q9UMS5 762 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 SCML1Q9UN30 329 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 V9GYY5 206 aaPredicted RBP17.28■□□□□ 0.36
LIME1-202ENST00000444951 PCDH15Q96QU1 1955 aa17.28■□□□□ 0.36
LIME1-202ENST00000444951 IGHV1OR15-9A0A0B4J2B8 117 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 LOC285095A0A1B0GVY8 99 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 TSPAN11A1L157 253 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 GOLGA8CPA6NN73 597 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 ERI2A8K979 691 aaKnown RBP17.27■□□□□ 0.36
LIME1-202ENST00000444951 TMEM63AO94886 807 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 SLC4A1P02730 911 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 ATXN1LP0C7T5 689 aaKnown RBP17.27■□□□□ 0.36
LIME1-202ENST00000444951 SPINK2P20155 84 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 TPSB2P20231 275 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 SFSWAPQ12872 951 aaKnown RBP17.27■□□□□ 0.36
LIME1-202ENST00000444951 CALCOCO2Q13137 446 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 TPSAB1Q15661 275 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 PIP5KL1Q5T9C9 394 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 RNASEH2BQ5TBB1 312 aaKnown RBP17.27■□□□□ 0.36
LIME1-202ENST00000444951 AGBL4Q5VU57 503 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 PEAR1Q5VY43 1037 aaPredicted RBP17.27■□□□□ 0.36
LIME1-202ENST00000444951 DENND2CQ68D51 928 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms