RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TFR2Q9UP52 801 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 ATMQ13315 3056 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.9□□□□□ -0.66
SF3A1-203ENST00000444440 CFAP69A5D8W1 941 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 NEMP2A6NFY4 417 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 LMO7DNF2Z398 122 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 YY2O15391 372 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 AKR1B10O60218 316 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 FZD6O60353 706 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 SOCS5O75159 536 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 HEXIM1O94992 359 aaKnown RBP10.9□□□□□ -0.66
SF3A1-203ENST00000444440 PGLSO95336 258 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 MT-CO3P00414 261 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 FUCA1P04066 466 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 HLA-DQB2P05538 268 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 ALPIP09923 528 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 ALPPL2P10696 532 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 CTPS1P17812 591 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 KDELR1P24390 212 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 VIPR1P32241 457 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 MAN1A1P33908 653 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 HNF1BP35680 557 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 PEX5P50542 639 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 RENBPP51606 427 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 HK3P52790 923 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 SRP54P61011 504 aaKnown RBP10.9□□□□□ -0.66
SF3A1-203ENST00000444440 PPARDQ03181 441 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 NIPAL4Q0D2K0 466 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 MTM1Q13496 603 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 PTK2BQ14289 1009 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 C6orf132Q5T0Z8 1188 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 MARC1Q5VT66 337 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 DENND2CQ68D51 928 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 EFL1Q7Z2Z2 1120 aaKnown RBP10.9□□□□□ -0.66
SF3A1-203ENST00000444440 RD3Q7Z3Z2 195 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 HSD11B1LQ7Z5J1 315 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 CNGA4Q8IV77 575 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 PLD5Q8N7P1 536 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 TC2NQ8N9U0 490 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 KYQ8NBH2 561 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 KCTD6Q8NC69 237 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 SEMA3CQ99985 751 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 DUSP23Q9BVJ7 150 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 DTLQ9NZJ0 730 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 SPASTQ9UBP0 616 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 CLCA2Q9UQC9 943 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 MGAQ8IWI9 3026 aa10.9□□□□□ -0.66
SF3A1-203ENST00000444440 PTPRQQ9UMZ3 2332 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 CPED1A4D0V7 1026 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 PMS2P1A4D2B8 440 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 EME2A4GXA9 379 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-203ENST00000444440 AKR1B15C9JRZ8 316 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-203ENST00000444440 TOR1BO14657 336 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 TPP1O14773 563 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 MATN3O15232 486 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 MTA2O94776 668 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 PRLP01236 227 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 MMP2P08253 660 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 CDK4P11802 303 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-203ENST00000444440 TRIM23P36406 574 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 HSPA9P38646 679 aaKnown RBP10.89□□□□□ -0.67
SF3A1-203ENST00000444440 ETV3P41162 512 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 PDX1P52945 283 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 RTP5Q14D33 572 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 ACOX1Q15067 660 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 PDK2Q15119 407 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 COL28A1Q2UY09 1125 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 ALG1LQ6GMV1 187 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 ESRP1Q6NXG1 681 aaKnown RBP10.89□□□□□ -0.67
SF3A1-203ENST00000444440 NPNTQ6UXI9 565 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 B4GALNT4Q76KP1 1039 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 CCL4L1Q8NHW4 92 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 ARRDC2Q8TBH0 407 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 BTN2A2Q8WVV5 523 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 TBATAQ96M53 351 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 CCDC42Q96M95 316 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 WDR92Q96MX6 357 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 TSGA13Q96PP4 275 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 RNF157Q96PX1 679 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 MCCC1Q96RQ3 725 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-203ENST00000444440 LGMNQ99538 433 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 IL12RB2Q99665 862 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 SLC13A1Q9BZW2 595 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 GOLPH3Q9H4A6 298 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 SIRPGQ9P1W8 387 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 KLQ9UEF7 1012 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 CD84Q9UIB8 345 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 SALL4Q9UJQ4 1053 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 PHTF1Q9UMS5 762 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 RAI2Q9Y5P3 530 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 ST14Q9Y5Y6 855 aa10.89□□□□□ -0.67
SF3A1-203ENST00000444440 BRINP1O60477 761 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 CSO75390 466 aaKnown RBP10.88□□□□□ -0.67
SF3A1-203ENST00000444440 RASGRP1O95267 797 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 SOD1P00441 154 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 GP1BAP07359 652 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 CCNCP24863 283 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms