RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 CNGA3Q16281 694 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 PRRT3Q5FWE3 981 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 FAXCQ5TGI0 409 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 ESRP1Q6NXG1 681 aaKnown RBP18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 LVRNQ6Q4G3 990 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 USP45Q70EL2 814 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 CCDC13Q8IYE1 715 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 LMX1AQ8TE12 382 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 PIH1D2Q8WWB5 315 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 LRRC61Q9BV99 259 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 MAK16Q9BXY0 300 aaKnown RBP18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 BRD8Q9H0E9 1235 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 CAAP1Q9H8G2 361 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 PNMA8BQ9ULN7 279 aaPredicted RBP18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 DGKBQ9Y6T7 804 aa18.88■□□□□ 0.61
ATPAF2-201ENST00000444058 A0A0A6YYK5 440 aaPredicted RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 LY6G6EA0A0G2JKS1 128 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 CACNB4O00305 520 aaPredicted RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 PDE2AO00408 941 aaPredicted RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 APOL1O14791 398 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 GCATO75600 419 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 RASGRP1O95267 797 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 MAP3K6O95382 1288 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 PCCBP05166 539 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 COMTP21964 271 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 CA4P22748 312 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 FECHP22830 423 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 CYLC1P35663 651 aaPredicted RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 RPL26P61254 145 aaKnown RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 IFI35P80217 286 aaPredicted RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 ELOCQ15369 112 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 LRRK1Q38SD2 2015 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 ODF2Q5BJF6 829 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 PNCKQ6P2M8 343 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 PROSER1Q86XN7 944 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 RAVER1Q8IY67 606 aaKnown RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 RBFAQ8N0V3 343 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 CCNYQ8ND76 341 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 ARRDC2Q8TBH0 407 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 CALR3Q96L12 384 aaKnown RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 WDR92Q96MX6 357 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 BOCQ9BWV1 1114 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 CCDC86Q9H6F5 360 aaKnown RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 RPL26L1Q9UNX3 145 aaKnown RBP18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 OR1A2Q9Y585 309 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 PCDHA13Q9Y5I0 950 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 U3KQA8 63 aa18.87■□□□□ 0.61
ATPAF2-201ENST00000444058 TDRD6O60522 2096 aaKnown RBP18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 FAM149AA5PLN7 773 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 A8MX80 341 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 TNFRSF10CO14798 259 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 PSTPIP1O43586 416 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 SPOPO43791 374 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 KRT1P04264 644 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 ALPIP09923 528 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 TSHRP16473 764 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 LHCGRP22888 699 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 TEAD1P28347 426 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 SRP54P61011 504 aaKnown RBP18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 ARHGEF7Q14155 803 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 PDK1Q15118 436 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 TAZQ16635 292 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 ALG11Q2TAA5 492 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 C6orf132Q5T0Z8 1188 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 HES3Q5TGS1 186 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 ENPP7Q6UWV6 458 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 TMTC1Q8IUR5 882 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 PLA2G15Q8NCC3 412 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 GLMNQ92990 594 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 FUBP1Q96AE4 644 aaKnown RBP18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 OLFM3Q96PB7 478 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 TCEAL2Q9H3H9 227 aaPredicted RBP18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 KLQ9UEF7 1012 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 DNPEPQ9ULA0 475 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 ALG6Q9Y672 507 aa18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 GOLGA4Q13439 2230 aaKnown RBP18.86■□□□□ 0.61
ATPAF2-201ENST00000444058 SHROOM3Q8TF72 1996 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 A0A0J9YYE9 177 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 TRABD2BA6NFA1 517 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 NPIPB15A6NHN6 443 aaPredicted RBP18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 YY2O15391 372 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 TRBC1P01850 177 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 HLA-DQB2P05538 268 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 ANXA6P08133 673 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 PDHA1P08559 390 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 ZNF30P17039 623 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 NOP2P46087 812 aaKnown RBP18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 NR2C2P49116 596 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 RPIAP49247 311 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 INSM1Q01101 510 aaPredicted RBP18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 DSC2Q02487 901 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 DEFB133Q30KQ1 61 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 BZW1Q7L1Q6 419 aaKnown RBP18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 HID1Q8IV36 788 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 DCBLD1Q8N8Z6 715 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 SCG3Q8WXD2 468 aaKnown RBP18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 NUS1Q96E22 293 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 DTD2Q96FN9 168 aa18.85■□□□□ 0.61
ATPAF2-201ENST00000444058 LGMNQ99538 433 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms