RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SMPD1P17405 629 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 WARSP23381 471 aaKnown RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 SPAM1P38567 509 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 PRKCIP41743 596 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 POLD2P49005 469 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 CAP1Q01518 475 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 TPGS2Q68CL5 300 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 ZNF605Q86T29 641 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 PCBD2Q9H0N5 130 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 SLC6A2P23975 617 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 CDK18Q07002 472 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 PLA2G4EQ3MJ16 856 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 UBE2R2Q712K3 238 aaPredicted RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 OTOP3Q7RTS5 596 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 HSD17B14Q9BPX1 270 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 TMEM79Q9BSE2 394 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 AGO3Q9H9G7 860 aaKnown RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 ATP5F1P24539 256 aaPredicted RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 RPL14P50914 215 aaKnown RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 LRRC32Q14392 662 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 SUZ12Q15022 739 aaKnown RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 PDZK1Q5T2W1 519 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 DNAJC14Q6Y2X3 702 aaPredicted RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 KREMEN2Q8NCW0 462 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 ITCHQ96J02 903 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 REXO4Q9GZR2 422 aaKnown RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 TRIP11Q15643 1979 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 TPP2P29144 1249 aaPredicted RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 RPL4P36578 427 aaKnown RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 INO80DQ53TQ3 878 aaPredicted RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 MIIPQ5JXC2 388 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 FAM171BQ6P995 826 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 WFIKKN2Q8TEU8 576 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 PRDM12Q9H4Q4 367 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 KLHL1Q9NR64 748 aa11.25□□□□□ -0.61
FN1-211ENST00000443816 ZMYND8Q9ULU4 1186 aaPredicted RBP11.25□□□□□ -0.61
FN1-211ENST00000443816 AP3D1O14617 1153 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 ASLP04424 464 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 ATP6V1B1P15313 513 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 TAS2R41P59536 307 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 SRSF11Q05519 484 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 GALNT18Q6P9A2 607 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 TMC3Q7Z5M5 1100 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 WRAP53Q9BUR4 548 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 CDADC1Q9BWV3 514 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 CLDND1Q9NY35 253 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 DMGDHQ9UI17 866 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 LYVE1Q9Y5Y7 322 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 GLYATL1P3A0A0U1RQE8 302 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 LIASO43766 372 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 TSPAN1O60635 241 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 GJB6O95452 261 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 PRG2P13727 222 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 UGT1A5P35504 534 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 YBEYP58557 167 aaPredicted RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 CERCAMQ5T4B2 595 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 ESRP1Q6NXG1 681 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 RPTNQ6XPR3 784 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 CFAP206Q8IYR0 622 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 CACTIN-AS1Q8N1I8 211 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 RNF145Q96MT1 663 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 PRDM8Q9NQV8 689 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 MAFBQ9Y5Q3 323 aaPredicted RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 PTSQ03393 145 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 LDLRAP1Q5SW96 308 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 KCNK18Q7Z418 384 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 GPR156Q8NFN8 814 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 PRCCQ92733 491 aaPredicted RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 GSTK1Q9Y2Q3 226 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 TRAFD1O14545 582 aaPredicted RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 ILF3Q12906 894 aaKnown RBP eCLIP11.24□□□□□ -0.616e-9■■■■■ 27.7
FN1-211ENST00000443816 SQLEQ14534 574 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 LIPMQ5VYY2 423 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 FOXR2Q6PJQ5 311 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 TMPRSS6Q8IU80 811 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 DPEP2Q9H4A9 486 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 C10orf88Q9H8K7 445 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 PHGDHO43175 533 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 CAPN1P07384 714 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.611e-6■■□□□ 14.2
FN1-211ENST00000443816 NQO1P15559 274 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 PPIBP23284 216 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 CDH5P33151 784 aaPredicted RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 MRPS35P82673 323 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 DGKKQ5KSL6 1271 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 VITQ6UXI7 678 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 C12orf56Q8IXR9 622 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 RIBC2Q9H4K1 309 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 PDZD7Q9H5P4 517 aa11.24□□□□□ -0.61
FN1-211ENST00000443816 DDX60Q8IY21 1712 aaKnown RBP11.24□□□□□ -0.61
FN1-211ENST00000443816 TM7SF2O76062 418 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms