RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 NDUFAF2Q8N183 169 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 TEX26Q8N6G2 289 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 CCNYQ8ND76 341 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 MAPK15Q8TD08 544 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 SPOCK2Q92563 424 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 RBM22Q9NW64 420 aaKnown RBP eCLIP20.14■□□□□ 0.81
LRCH3-208ENST00000443727 DKK4Q9UBT3 224 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 RAI2Q9Y5P3 530 aa20.14■□□□□ 0.81
LRCH3-208ENST00000443727 ZZEF1O43149 2961 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 LY6G6EA0A0G2JKS1 128 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 MATN3O15232 486 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 YY2O15391 372 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 PGLSO95336 258 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 TNFP01375 233 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 KELP23276 732 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 KDELR1P24390 212 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 CCNCP24863 283 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 ESRP1Q6NXG1 681 aaKnown RBP20.13■□□□□ 0.81
LRCH3-208ENST00000443727 EFL1Q7Z2Z2 1120 aaKnown RBP20.13■□□□□ 0.81
LRCH3-208ENST00000443727 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.13■□□□□ 0.81
LRCH3-208ENST00000443727 RAPGEF5Q92565 580 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 FAF2Q96CS3 445 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 NUS1Q96E22 293 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 MAK16Q9BXY0 300 aaKnown RBP20.13■□□□□ 0.81
LRCH3-208ENST00000443727 WDR26Q9H7D7 661 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 U3KQA8 63 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 PKD1L2Q7Z442 2459 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 FREM2Q5SZK8 3169 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 DMXL2Q8TDJ6 3036 aa20.13■□□□□ 0.81
LRCH3-208ENST00000443727 ANKRD36A6QL64 1941 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GOLGA6CA6NDK9 693 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GOLGA6BA6NDN3 693 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 HEXIM1O94992 359 aaKnown RBP20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GOLGA6DP0CG33 693 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 TNNT1P13805 278 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 CCNB1P14635 433 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 CES1P23141 567 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 EPHB1P54762 984 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GBE1Q04446 702 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 CNGA3Q16281 694 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 C6orf132Q5T0Z8 1188 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GUSBP11Q6P575 273 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GKN2Q86XP6 184 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 CACTIN-AS1Q8N1I8 211 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 PQLC3Q8N755 202 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 DCBLD1Q8N8Z6 715 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 FUBP1Q96AE4 644 aaKnown RBP20.12■□□□□ 0.81
LRCH3-208ENST00000443727 TSGA13Q96PP4 275 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 DEPDC7Q96QD5 511 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 BOCQ9BWV1 1114 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 CLPBQ9H078 707 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 KCTD5Q9NXV2 234 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 GULP1Q9UBP9 304 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 MOSPD1Q9UJG1 213 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 CHD6Q8TD26 2715 aa20.12■□□□□ 0.81
LRCH3-208ENST00000443727 WDFY3Q8IZQ1 3526 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 PDE2AO00408 941 aaPredicted RBP20.11■□□□□ 0.81
LRCH3-208ENST00000443727 KRT1P04264 644 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 CELA2BP08218 269 aaPredicted RBP20.11■□□□□ 0.81
LRCH3-208ENST00000443727 CTPS1P17812 591 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 CA4P22748 312 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 KIAA1024LP59773 190 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 TBX2Q13207 712 aaPredicted RBP20.11■□□□□ 0.81
LRCH3-208ENST00000443727 PNCKQ6P2M8 343 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 SARM1Q6SZW1 724 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 OR56A4Q8NGH8 313 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 TPCN2Q8NHX9 752 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 LRRN4Q8WUT4 740 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 MAML1Q92585 1016 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 NAT6Q93015 286 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 SCRN2Q96FV2 425 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 COQ10AQ96MF6 247 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 RNF157Q96PX1 679 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 NRSN2Q9GZP1 204 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 SIRPGQ9P1W8 387 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 AMACRQ9UHK6 382 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 HEY1Q9Y5J3 304 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 APC2O95996 2303 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 ACACAQ13085 2346 aa20.11■□□□□ 0.81
LRCH3-208ENST00000443727 SHROOM3Q8TF72 1996 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 NPIPB15A6NHN6 443 aaPredicted RBP20.1■□□□□ 0.81
LRCH3-208ENST00000443727 MTA2O94776 668 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 ETV3P41162 512 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 DSC2Q02487 901 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 LVRNQ6Q4G3 990 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 SLC35F3Q8IY50 421 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 CCDC13Q8IYE1 715 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 SDR16C5Q8N3Y7 309 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 FATE1Q969F0 183 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 PDXPQ96GD0 296 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 DTLQ9NZJ0 730 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 INTUQ9ULD6 942 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 PADI4Q9UM07 663 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 GPR34Q9UPC5 381 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 LRRK1Q38SD2 2015 aa20.1■□□□□ 0.81
LRCH3-208ENST00000443727 EME2A4GXA9 379 aaPredicted RBP20.09■□□□□ 0.81
LRCH3-208ENST00000443727 TMEM202A6NGA9 273 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 APOL1O14791 398 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 SPOPO43791 374 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms