RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZNF189O75820 626 aaPredicted RBP16.07■□□□□ 0.16
USP39-205ENST00000442708 HEXIM1O94992 359 aaKnown RBP16.07■□□□□ 0.16
USP39-205ENST00000442708 NDST3O95803 873 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 AGTP01019 485 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 IFNB1P01574 187 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 CFIP05156 583 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 PIRTP0C851 137 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 ADRA1AP35348 466 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 GRIA4P48058 902 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 GEMP55040 296 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 CSRP2Q16527 193 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 CYP1B1Q16678 543 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 P3H1Q32P28 736 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 TRIM61Q5EBN2 209 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 KCTD11Q693B1 232 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 NAPEPLDQ6IQ20 393 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 SLC23A3Q6PIS1 610 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 GCNT7Q6ZNI0 430 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 ARHGEF18Q6ZSZ5 1173 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 USP45Q70EL2 814 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 HSD11B1LQ7Z5J1 315 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 C12orf50Q8NA57 414 aaPredicted RBP16.07■□□□□ 0.16
USP39-205ENST00000442708 TMEM145Q8NBT3 493 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 IPMKQ8NFU5 416 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 ASB12Q8WXK4 309 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 CENPTQ96BT3 561 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 C16orf45Q96MC5 204 aaPredicted RBP16.07■□□□□ 0.16
USP39-205ENST00000442708 COQ10AQ96MF6 247 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 MBNL1Q9NR56 388 aaKnown RBP16.07■□□□□ 0.16
USP39-205ENST00000442708 TPX2Q9ULW0 747 aaKnown RBP16.07■□□□□ 0.16
USP39-205ENST00000442708 DMTF1Q9Y222 760 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 SCN8AQ9UQD0 1980 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 A0A1B0GVT2 93 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 POM121BA6NF01 834 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 PRAMEF26H0Y7S4 382 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 LRP3O75074 770 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 ANXA9O76027 345 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 TM7SF2O76062 418 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 ELFN1P0C7U0 828 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 HNRNPA2B1P22626 353 aaKnown RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 CASQ1P31415 396 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 RPL22P35268 128 aaKnown RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 RACK1P63244 317 aaKnown RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 PTSQ03393 145 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 SGCGQ13326 291 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 MPP3Q13368 585 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 SPARCL1Q14515 664 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 SLC1A5Q15758 541 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 WSCD2Q2TBF2 565 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 SIRPB2Q5JXA9 342 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 LRRC66Q68CR7 880 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 PELI3Q8N2H9 469 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 SLC25A41Q8N5S1 370 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 CEP76Q8TAP6 659 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 MAGOHBQ96A72 148 aaKnown RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 EID2BQ96D98 161 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 RMDN1Q96DB5 314 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 IFT43Q96FT9 208 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 BMFQ96LC9 184 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 LYSMD1Q96S90 227 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 NAP1L3Q99457 506 aaPredicted RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 APOL2Q9BQE5 337 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 FICDQ9BVA6 458 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 ADGRE3Q9BY15 652 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 AASDHPPTQ9NRN7 309 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 HOMER3Q9NSC5 361 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 SUSD2Q9UGT4 822 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 SPO11Q9Y5K1 396 aa16.06■□□□□ 0.16
USP39-205ENST00000442708 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.06■□□□□ 0.16
USP39-205ENST00000442708 LNP1A1A4G5 178 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 KHNYNO15037 678 aaKnown RBP16.05■□□□□ 0.16
USP39-205ENST00000442708 USP12O75317 370 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 RECQL5O94762 991 aaPredicted RBP16.05■□□□□ 0.16
USP39-205ENST00000442708 CLDN7O95471 211 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 EPOP01588 193 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 C1SP09871 688 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 CYP2A6P11509 494 aaPredicted RBP16.05■□□□□ 0.16
USP39-205ENST00000442708 GNSP15586 552 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 CD38P28907 300 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 IGFALSP35858 605 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 NUDT1P36639 197 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 COILP38432 576 aaPredicted RBP16.05■□□□□ 0.16
USP39-205ENST00000442708 DPP6P42658 865 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 AFF3P51826 1226 aaKnown RBP16.05■□□□□ 0.16
USP39-205ENST00000442708 AGERQ15109 404 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 DENND2CQ68D51 928 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 DENND5AQ6IQ26 1287 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 RANBP10Q6VN20 620 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 PRR23CQ6ZRP0 262 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 OR2I1PQ8NGU4 316 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 ETNK1Q9HBU6 452 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 SLC6A14Q9UN76 642 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 DMXL1Q9Y485 3027 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 KNL1Q8NG31 2342 aa16.05■□□□□ 0.16
USP39-205ENST00000442708 AURKAO14965 403 aa16.04■□□□□ 0.16
USP39-205ENST00000442708 VILLO15195 856 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms