RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 NEK9Q8TD19 979 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 IPCEF1Q8WWN9 437 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 USP13Q92995 863 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIM63Q969Q1 353 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MUL1Q969V5 352 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPAG5Q96R06 1193 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RHOXF2Q9BQY4 288 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MESP1Q9BRJ9 268 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMEM79Q9BSE2 394 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 CRACR2AQ9BSW2 395 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 SORBS1Q9BX66 1292 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 FUT8Q9BYC5 575 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GLIS2Q9BZE0 524 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 UBXN6Q9BZV1 441 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF518BQ9C0D4 1074 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRSS22Q9GZN4 317 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GANQ9H2C0 597 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TAOK3Q9H2K8 898 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 UNC45AQ9H3U1 944 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MLXIPQ9HAP2 919 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 PARVGQ9HBI0 331 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 POLD4Q9HCU8 107 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIM36Q9NQ86 728 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TBC1D22BQ9NU19 505 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 FBXO28Q9NVF7 368 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 LRFN1Q9P244 771 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 IGSF9Q9P2J2 1179 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 FBXL5Q9UKA1 691 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 AMFRQ9UKV5 643 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAN2B2Q9Y2E5 1009 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 HYOU1Q9Y4L1 999 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 CEP83Q9Y592 693 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 UBIAD1Q9Y5Z9 338 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 SIPA1L1O43166 1804 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 UBE4BO95155 1302 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 FRMPD4Q14CM0 1322 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RGPD3A6NKT7 1758 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 RGPD4Q7Z3J3 1758 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 BAZ2BQ9UIF8 2168 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 A0A087WZ62 844 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 GTPBP10A4D1E9 387 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TISP43B9A030 160 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 DDX39AO00148 427 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 BTN3A1O00481 513 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAP2K7O14733 419 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 DSCR3O14972 297 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 HNRNPDLO14979 420 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TGFB1I1O43294 461 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 BUB1O43683 1085 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 EXOC3O60645 756 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 MOSPD3O75425 235 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 RNASEH2AO75792 299 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 FLOT1O75955 427 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 INMTO95050 263 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 LYPLA2O95372 231 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TFRCP02786 760 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 IGKV2-30P06310 120 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCDC172P0C7W6 258 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ACTN1P12814 892 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 KRT13P13646 458 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 UCHL3P15374 230 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 FERP16591 822 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 GABRB3P28472 473 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRKCIP41743 596 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 STAT1P42224 750 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 PAFAH1B1P43034 410 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 FMO5P49326 533 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CASP4P49662 377 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 JAK3P52333 1124 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 DGKEP52429 567 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF131P52739 623 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SNRPFP62306 86 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 VSNL1P62760 191 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 MPP1Q00013 466 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC13A2Q13183 592 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ALCAMQ13740 583 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCNIQ14094 377 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 PTK2BQ14289 1009 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYBPC2Q14324 1141 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF268Q14587 947 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SMC1AQ14683 1233 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TAF5Q15542 800 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC18A3Q16572 532 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZC2HC1CQ53FD0 456 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 TANGO2Q6ICL3 276 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCNI2Q6ZMN8 369 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF66Q6ZN08 573 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF771Q7L3S4 317 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAATS1Q7Z4T9 603 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 IRF2BP2Q7Z5L9 587 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 DEFB132Q7Z7B7 95 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 VPS36Q86VN1 386 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 CAND1Q86VP6 1230 aaKnown RBP3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SYCP3Q8IZU3 236 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ABRAQ8N0Z2 381 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 GALNT15Q8N3T1 639 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC15A4Q8N697 577 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 ANKRD13CQ8N6S4 541 aa3.61□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM133AQ8N9E0 248 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms