RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CNPY4Q8N129 248 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 FAM160A2Q8N612 972 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 FRMD1Q8N878 549 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZBTB44Q8NCP5 570 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 RLN3Q8WXF3 142 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZNF669Q96BR6 464 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MRGPRX1Q96LB2 322 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 APOL2Q9BQE5 337 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 IL22Q9GZX6 179 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SLC25A51Q9H1U9 297 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 EPN3Q9H201 632 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MAGEH1Q9H213 219 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZNF180Q9UJW8 692 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 PCDHGA2Q9Y5H1 932 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MAGEB16A2A368 324 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 FAM47DPA6NHR8 397 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 J3KR12 359 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PRPF4O43172 522 aaKnown RBP eCLIP14.64□□□□□ -0.075e-7■■■■□ 24.8
TNFRSF1A-204ENST00000440083 ATP9BO43861 1147 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 BNIP3LO60238 219 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PRAMEF11O60813 436 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 LILRB5O75023 590 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 KRT38O76015 456 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CD160O95971 181 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 ETFBP38117 255 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SERPINH1P50454 418 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 DMTNQ08495 405 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 MGAT5Q09328 741 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 LBRQ14739 615 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 DLG2Q15700 870 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SEPT7Q16181 437 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 ACCSLQ4AC99 568 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 MARK2Q7KZI7 788 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 TMPRSS6Q8IU80 811 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 C4orf33Q8N1A6 199 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 STK40Q8N2I9 435 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 KDM1BQ8NB78 822 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PPHLN1Q8NEY8 458 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 OR2T3Q8NH03 318 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SPATA22Q8NHS9 363 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 BCAS4Q8TDM0 211 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PTPRN2Q92932 1015 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 ALKBH8Q96BT7 664 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SGSM3Q96HU1 749 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 ZNF599Q96NL3 588 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 FAM126AQ9BYI3 521 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 TNKS2Q9H2K2 1166 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SSU72Q9NP77 194 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 TXNDC16Q9P2K2 825 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 EBF1Q9UH73 591 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 HS3ST2Q9Y278 367 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 FCF1Q9Y324 198 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 RPS6KL1Q9Y6S9 549 aa14.64□□□□□ -0.07
TNFRSF1A-204ENST00000440083 DMDP11532 3685 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 EDDM13A0A1B0GTR0 161 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 GMNCA6NCL1 334 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 FOXO6A8MYZ6 492 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 NDUFAB1O14561 156 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 KDELR3O43731 214 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SPAG7O75391 227 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PMPCBO75439 489 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 USP1O94782 785 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SNRPAP09012 282 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CREB1P16220 341 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 BCKDHBP21953 392 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CNTFP26441 200 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 RPS14P62263 151 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 OLIG2Q13516 323 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 E2F5Q15329 346 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 LPAL2Q16609 132 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 C22orf39Q6P5X5 142 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 ZNF449Q6P9G9 518 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 TRMT10BQ6PF06 316 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CYS1Q717R9 158 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 TEX26Q8N6G2 289 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 MTBPQ96DY7 904 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CERS2Q96G23 380 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 NSRP1Q9H0G5 558 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 VPS45Q9NRW7 570 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SUN2Q9UH99 717 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SOX13Q9UN79 622 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CYP8B1Q9UNU6 501 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 FAM169AQ9Y6X4 670 aa14.63□□□□□ -0.07
TNFRSF1A-204ENST00000440083 FAM237BA0A1B0GVD1 139 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CXorf49A8MYA2 514 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 ZNF821O75541 412 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 RPP40O75818 363 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PIAS1O75925 651 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PEX11BO96011 259 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 MT-CYBP00156 380 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 KRT4P19013 534 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 CA4P22748 312 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 NNMTP40261 264 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 NBL1P41271 181 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 PSMD8P48556 350 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 VASPP50552 380 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 METAP1P53582 386 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 IL9RQ01113 521 aa14.62□□□□□ -0.07
TNFRSF1A-204ENST00000440083 SLC10A7Q0GE19 358 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms