RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 TNFRSF10CO14798 259 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 CPP00450 1065 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 MPOP05164 745 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 MMP13P45452 471 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 LSSP48449 732 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 ARSEP51690 589 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 GABREP78334 506 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 MARC1Q5VT66 337 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 RBM44Q6ZP01 1051 aaKnown RBP16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 TEX26Q8N6G2 289 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 KYQ8NBH2 561 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 OR56A4Q8NGH8 313 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 COQ10AQ96MF6 247 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 ZNF578Q96N58 590 aaPredicted RBP16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 ZNF670Q9BS34 389 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 WDR26Q9H7D7 661 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 POLR1BQ9H9Y6 1135 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 UVRAGQ9P2Y5 699 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 PHTF1Q9UMS5 762 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 IGSF10Q6WRI0 2623 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 TTC24A2A3L6 582 aaPredicted RBP16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 PSMD11O00231 422 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 MFSD11O43934 449 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 PROSCO94903 275 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 HEXIM1O94992 359 aaKnown RBP16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 TNFP01375 233 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 CD48P09326 243 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 HOXB3P14651 431 aaPredicted RBP16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 ITPKBP27987 946 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 VIPR1P32241 457 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 ERVPABLB-1P60509 514 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 GALNT2Q10471 571 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 TRAF2Q12933 501 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 TRIM14Q14142 442 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 DPYSL3Q14195 570 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 ACOX1Q15067 660 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 PAFAH1B3Q15102 231 aaKnown RBP16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 CNGA3Q16281 694 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 SLC18A3Q16572 532 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 KCTD16Q68DU8 428 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 NCBP2-AS2Q69YL0 99 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 PNCKQ6P2M8 343 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 CRTC1Q6UUV9 634 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 RD3Q7Z3Z2 195 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 OR6C4Q8NGE1 309 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 PDCD6IPQ8WUM4 868 aaKnown RBP16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 FATE1Q969F0 183 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 NUS1Q96E22 293 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 HIC2Q96JB3 615 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 MCCC1Q96RQ3 725 aaPredicted RBP16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 CCDC3Q9BQI4 270 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 FGF22Q9HCT0 170 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 GPR34Q9UPC5 381 aa16.31■□□□□ 0.2
SNRPD3-204ENST00000439775 TMEM202A6NGA9 273 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 A8MX80 341 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 PDE2AO00408 941 aaPredicted RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 NTN3O00634 580 aaPredicted RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 PGLSO95336 258 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 H2AFZP0C0S5 128 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 CYP2A6P11509 494 aaPredicted RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 GARSP41250 739 aaKnown RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 SSR1P43307 286 aaKnown RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 PCBP4P57723 403 aaKnown RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 MAXP61244 160 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 PDK2Q15119 407 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 ALG1LQ6GMV1 187 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 TIGD7Q6NT04 549 aaPredicted RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 USP45Q70EL2 814 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 H2AFVQ71UI9 128 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 CBARPQ8N350 705 aaPredicted RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 ZNF248Q8NDW4 579 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 CTNNBL1Q8WYA6 563 aaPredicted RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 OR1E3Q8WZA6 343 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 DTD2Q96FN9 168 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 SCRN2Q96FV2 425 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 CRELD1Q96HD1 420 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 DNAJC7Q99615 494 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 ASCL3Q9NQ33 180 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 SIRPGQ9P1W8 387 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 CTTNBP2NLQ9P2B4 639 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 AMACRQ9UHK6 382 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 PPIL1Q9Y3C6 166 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 ENTPD2Q9Y5L3 495 aa16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 SMG1Q96Q15 3661 aaKnown RBP16.3■□□□□ 0.2
SNRPD3-204ENST00000439775 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 NPIPB15A6NHN6 443 aaPredicted RBP16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 KRT7P08729 469 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 MYCLP1P12525 358 aaPredicted RBP16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 LHCGRP22888 699 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 MAN1A1P33908 653 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 PDX1P52945 283 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 SPIDRQ14159 915 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 SOWAHCQ53LP3 525 aaPredicted RBP16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 ARMC12Q5T9G4 340 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 SPECC1LQ69YQ0 1117 aa16.29■□□□□ 0.2
SNRPD3-204ENST00000439775 PELI3Q8N2H9 469 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms