RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 RPL9P32969 192 aaKnown RBP16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 ATP4BP51164 291 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 ADRM1Q16186 407 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 NOMO2Q5JPE7 1267 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 FAM45BPQ6NSW5 357 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 KLC3Q6P597 504 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 GALNT7Q86SF2 657 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC22A9Q8IVM8 553 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 SPNS2Q8IVW8 549 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 RTL3Q8N8U3 475 aaKnown RBP16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 ZFP28Q8NHY6 868 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 FAM45AQ8TCE6 357 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 LPGAT1Q92604 370 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 HIC2Q96JB3 615 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 FCRL2Q96LA5 508 aaPredicted RBP16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 UBXN10Q96LJ8 280 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 PAAF1Q9BRP4 392 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC25A23Q9BV35 468 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 GSTO2Q9H4Y5 243 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 ATP13A1Q9HD20 1204 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 TMLHEQ9NVH6 421 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 OSER1Q9NX31 292 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 OGDHLQ9ULD0 1010 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 SQORQ9Y6N5 450 aa16.46■□□□□ 0.22
CLCNKA-203ENST00000439316 PTPRDP23468 1912 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 A0A0U1RQF3 1178 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 ARL5CA6NH57 179 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 MRASO14807 208 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 ZNF623O75123 536 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 CCDC166P0CW27 439 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 ODC1P11926 461 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 HDCP19113 662 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC7A1P30825 629 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 CCR1P32246 355 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 SCNN1GP51170 649 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 NR1H2P55055 460 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 RALGDSQ12967 914 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 IKBKEQ14164 716 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 ACAP2Q15057 778 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 UPP1Q16831 310 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 PABPC1LQ4VXU2 614 aaKnown RBP16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 C6orf10Q5SRN2 563 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 IRAK1BP1Q5VVH5 260 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 CYHR1Q6ZMK1 362 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 RPS27LQ71UM5 84 aaKnown RBP16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 RNF135Q8IUD6 432 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 LRRC49Q8IUZ0 686 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 SCAMP5Q8TAC9 235 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 LRTOMTQ8WZ04 291 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 TRMOQ9BU70 441 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 OCEL1Q9H607 264 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 COQ10BQ9H8M1 238 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 CCDC167Q9P0B6 97 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 TMEM181Q9P2C4 612 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 RNF11Q9Y3C5 154 aa16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 KIAA0100Q14667 2235 aaKnown RBP16.45■□□□□ 0.22
CLCNKA-203ENST00000439316 TANC1Q9C0D5 1861 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 MSI1O43347 362 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 SRP72O76094 671 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 PENKP01210 267 aaPredicted RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 PLK1P53350 603 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 SAMD4BQ5PRF9 694 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 HECTD2Q5U5R9 776 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 KDELC2Q7Z4H8 507 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 CARM1Q86X55 608 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 FAM126BQ8IXS8 530 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 GABPB2Q8TAK5 448 aaPredicted RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 OSBPL11Q9BXB4 747 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC25A51Q9H1U9 297 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 ABCC13Q9NSE7 274 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 ATXN10Q9UBB4 475 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 IPO11Q9UI26 975 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 GIT1Q9Y2X7 761 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 TRAF6Q9Y4K3 522 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 TDRD15B5MCY1 1934 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 MIA3Q5JRA6 1907 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 UBFD1O14562 309 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 NRP2O60462 931 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 GPC4O75487 556 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 PAPSS2O95340 614 aaPredicted RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 PEX11BO96011 259 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 CYP11A1P05108 521 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 IMPDH1P20839 514 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 NRG1Q02297 640 aaPredicted RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 PCSK7Q16549 785 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 NRF1Q16656 503 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 TMEM259Q4ZIN3 620 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 PTAR1Q7Z6K3 402 aaPredicted RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 HERC6Q8IVU3 1022 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 OR13J1Q8NGT2 312 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 ANKRD49Q8WVL7 239 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 CASP10Q92851 521 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 L3HYPDHQ96EM0 354 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 SEMA6AQ9H2E6 1030 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 SFMBT1Q9UHJ3 866 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 CROTQ9UKG9 612 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 CNOT6Q9ULM6 557 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms