RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 NDST3O95803 873 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 PIRTP0C851 137 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 ETS1P14921 441 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 GM2AP17900 193 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 NFKBIAP25963 317 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 AKT2P31751 481 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 CHRNA4P43681 627 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 CSNK1EP49674 416 aaKnown RBP16.2■□□□□ 0.18
SNRPB-202ENST00000438552 AFF3P51826 1226 aaKnown RBP16.2■□□□□ 0.18
SNRPB-202ENST00000438552 CLDN2P57739 230 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 ETF1P62495 437 aaKnown RBP16.2■□□□□ 0.18
SNRPB-202ENST00000438552 RACK1P63244 317 aaKnown RBP16.2■□□□□ 0.18
SNRPB-202ENST00000438552 SGCGQ13326 291 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 MPP3Q13368 585 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 OLIG2Q13516 323 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 DENND2CQ68D51 928 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 TTC27Q6P3X3 843 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 SLC23A3Q6PIS1 610 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 KDM7AQ6ZMT4 941 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 GCNT7Q6ZNI0 430 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 PRR23CQ6ZRP0 262 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 NDUFAF2Q8N183 169 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 TMEM145Q8NBT3 493 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 FICDQ9BVA6 458 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 FSD1LQ9BXM9 530 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 CAPN10Q9HC96 672 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 SAR1BQ9Y6B6 198 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.2■□□□□ 0.18
SNRPB-202ENST00000438552 FAM186AA6NE01 2351 aa16.2■□□□□ 0.18
SNRPB-202ENST00000438552 RIF1Q5UIP0 2472 aaKnown RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 A0A1B0GVT2 93 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 A0A1W2PR77 199 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 LNP1A1A4G5 178 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 PRR5-ARHGAP8B1AHC4 643 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 ANKRD66B4E2M5 251 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 KHNYNO15037 678 aaKnown RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 LZTS3O60299 673 aaPredicted RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 WNT1P04628 370 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 ATXN1LP0C7T5 689 aaKnown RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 ZSCAN5DPP0CG00 497 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 STIP1P31948 543 aaKnown RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 IGFALSP35858 605 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 IRX4P78413 519 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 ARHGEF7Q14155 803 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 PRPSAP1Q14558 356 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 P3H1Q32P28 736 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 SIRPB2Q5JXA9 342 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 LRRC66Q68CR7 880 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 CRTC1Q6UUV9 634 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 NYAP1Q6ZVC0 841 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 HSD11B1LQ7Z5J1 315 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 SLC25A41Q8N5S1 370 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 CCDC89Q8N998 374 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 C12orf50Q8NA57 414 aaPredicted RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 TP53I13Q8NBR0 393 aaPredicted RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 KLF6Q99612 283 aaPredicted RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 APOL2Q9BQE5 337 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 NUSAP1Q9BXS6 441 aaKnown RBP16.19■□□□□ 0.18
SNRPB-202ENST00000438552 HOMER3Q9NSC5 361 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 RXFP3Q9NSD7 469 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 SLC6A14Q9UN76 642 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 GVINP1Q7Z2Y8 2422 aa16.19■□□□□ 0.18
SNRPB-202ENST00000438552 GOLGA6L10A0A0M3HER8 536 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 C1orf232A0A0U1RR37 186 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 LOC285095A0A1B0GVY8 99 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 RECQL5O94762 991 aaPredicted RBP16.18■□□□□ 0.18
SNRPB-202ENST00000438552 AGTP01019 485 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 SLC4A1P02730 911 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 C1SP09871 688 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 CD38P28907 300 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 CASQ1P31415 396 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 TNNT3P45378 269 aaPredicted RBP16.18■□□□□ 0.18
SNRPB-202ENST00000438552 BNC1Q01954 994 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 GRIK2Q13002 908 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 SPARCL1Q14515 664 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 ACOX1Q15067 660 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 IRF4Q15306 451 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 TEAD4Q15561 434 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 CYP1B1Q16678 543 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 PARP6Q2NL67 630 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 GSTA5Q7RTV2 222 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 PTAR1Q7Z6K3 402 aaPredicted RBP16.18■□□□□ 0.18
SNRPB-202ENST00000438552 CREG2Q8IUH2 290 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 KIAA2013Q8IYS2 634 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 DENND6BQ8NEG7 585 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 ASB12Q8WXK4 309 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
SNRPB-202ENST00000438552 COQ10AQ96MF6 247 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 C1QTNF7Q9BXJ2 289 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 MBNL1Q9NR56 388 aaKnown RBP16.18■□□□□ 0.18
SNRPB-202ENST00000438552 DRG1Q9Y295 367 aaKnown RBP16.18■□□□□ 0.18
SNRPB-202ENST00000438552 AAR2Q9Y312 384 aaKnown RBP16.18■□□□□ 0.18
SNRPB-202ENST00000438552 SPO11Q9Y5K1 396 aa16.18■□□□□ 0.18
SNRPB-202ENST00000438552 ZNF106Q9H2Y7 1883 aaKnown RBP16.17■□□□□ 0.18
SNRPB-202ENST00000438552 POM121BA6NF01 834 aa16.17■□□□□ 0.18
SNRPB-202ENST00000438552 PHF2O75151 1096 aa16.17■□□□□ 0.18
SNRPB-202ENST00000438552 USP12O75317 370 aa16.17■□□□□ 0.18
SNRPB-202ENST00000438552 CLDN7O95471 211 aa16.17■□□□□ 0.18
SNRPB-202ENST00000438552 PCCBP05166 539 aa16.17■□□□□ 0.18
SNRPB-202ENST00000438552 ENGP17813 658 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms