RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 MARCH4Q9P2E8 410 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 COPG2Q9UBF2 871 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 FBXL17Q9UF56 701 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 CNOT8Q9UFF9 292 aaKnown RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 NENFQ9UMX5 172 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 CEPT1Q9Y6K0 416 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 A0A0U1RQF3 1178 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 A0A1W2PQF6 199 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 A8MV72 311 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 KCNU1A8MYU2 1149 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 BTBD18B2RXH4 712 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 TP73O15350 636 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 IPO8O15397 1037 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 TLX3O43711 291 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 CNOT3O75175 753 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 CSPG5O95196 566 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 SYF2O95926 243 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 IFNA2P01563 188 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 DNTTP04053 509 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 IL7RP16871 459 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 AGAP20933 346 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 SP100P23497 879 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 TBXAS1P24557 533 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 CD38P28907 300 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 MMP13P45452 471 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 NRIP1P48552 1158 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 STAT2P52630 851 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 IFI35P80217 286 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 GRIK3Q13003 919 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 RASA2Q15283 850 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 CCDC96Q2M329 555 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 SOWAHAQ2M3V2 549 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 Q5PR19 223 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 PXDC1Q5TGL8 231 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 LRCH2Q5VUJ6 765 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 METTL2BQ6P1Q9 378 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 ZNF66Q6ZN08 573 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 CACNA2D4Q7Z3S7 1137 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 YTHDF3Q7Z739 585 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 ZBTB2Q8N680 514 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 TEX45Q8NA69 505 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 KDM1BQ8NB78 822 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 CCDC191Q8NCU4 936 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 ZNF653Q96CK0 615 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 RRNAD1Q96FB5 475 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 METTL2AQ96IZ6 378 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 FAM110AQ9BQ89 295 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 APOL6Q9BWW8 343 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 GLIS2Q9BZE0 524 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 KLHL31Q9H511 634 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 CYSLTR2Q9NS75 346 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 TMEM184CQ9NVA4 438 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 ARHGEF38Q9NXL2 777 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 TAB2Q9NYJ8 693 aa4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 UBA2Q9UBT2 640 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 SEC63Q9UGP8 760 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 R3HDM2Q9Y2K5 976 aaKnown RBP4.65□□□□□ -1.67
HMGB1P45-201ENST00000435986 TMEM202A6NGA9 273 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 E5RJQ4 531 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PPFIA2O75334 1257 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 ERAL1O75616 437 aaKnown RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 RGS11O94810 467 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 CHRNB1P11230 501 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 VDRP11473 427 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 CHRNB2P17787 502 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 GABRB1P18505 474 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 KELP23276 732 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 HOXC9P31274 260 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 SHMT1P34896 483 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 RASSF2P50749 326 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 MRPS5P82675 430 aaKnown RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 MRPS34P82930 218 aaKnown RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PKP1Q13835 747 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 EZH2Q15910 746 aaKnown RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 SRSF7Q16629 238 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 ALG11Q2TAA5 492 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 BMP2KLQ5H9B9 411 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 CXorf66Q5JRM2 361 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 EPHA10Q5JZY3 1008 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PAPD7Q5XG87 772 aaKnown RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 GGNBP1Q5YKI7 109 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 SIGIRRQ6IA17 410 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PCSK4Q6UW60 755 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PARM1Q6UWI2 310 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 SEPT14Q6ZU15 432 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 MON1BQ7L1V2 547 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 ARID3BQ8IVW6 561 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 MCEMP1Q8IX19 187 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 MB21D2Q8IYB1 491 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 AGBL3Q8NEM8 1001 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 GSDMBQ8TAX9 411 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 ZG16BQ96DA0 208 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 SLC41A2Q96JW4 573 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 SH3GL2Q99962 352 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 PCGF1Q9BSM1 259 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 KIFC3Q9BVG8 833 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 MRIQ9BWK5 157 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 NPFFR1Q9GZQ6 430 aa4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 RSPH9Q9H1X1 276 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P45-201ENST00000435986 HRH4Q9H3N8 390 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms