RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 AFMIDQ63HM1 303 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 SASS6Q6UVJ0 657 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 SPRED1Q7Z699 444 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 ARHGAP12Q8IWW6 846 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 NPWQ8N729 165 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 PEBP4Q96S96 227 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 KCTD15Q96SI1 283 aaPredicted RBP15.76■□□□□ 0.11
CALD1-208ENST00000435928 TMEM168Q9H0V1 697 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 ANO10Q9NW15 660 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 PCSK1NQ9UHG2 260 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 MOSPD1Q9UJG1 213 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 RNF215Q9Y6U7 377 aa15.76■□□□□ 0.11
CALD1-208ENST00000435928 A8MX80 341 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 TRAFD1O14545 582 aaPredicted RBP15.75■□□□□ 0.11
CALD1-208ENST00000435928 PRPSAP2O60256 369 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 NOBOXO60393 691 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 RNF8O76064 485 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 HOXC4P09017 264 aaPredicted RBP15.75■□□□□ 0.11
CALD1-208ENST00000435928 LIPCP11150 499 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 PNLIPP16233 465 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 TNFAIP3P21580 790 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 TRIM23P36406 574 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 SCNN1BP51168 640 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 IL10RBQ08334 325 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 NSUN2Q08J23 767 aaKnown RBP eCLIP15.75■□□□□ 0.11
CALD1-208ENST00000435928 ARHGEF7Q14155 803 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 HLTFQ14527 1009 aaKnown RBP eCLIP15.75■□□□□ 0.119e-6■□□□□ 9.4
CALD1-208ENST00000435928 ACOX1Q15067 660 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
CALD1-208ENST00000435928 SPECC1LQ69YQ0 1117 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 PLEKHA7Q6IQ23 1121 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 OGFOD3Q6PK18 319 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 ARHGAP36Q6ZRI8 547 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 KIAA1524Q8TCG1 905 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 TMEM159Q96B96 161 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 DPEP2Q9H4A9 486 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 CYP4F12Q9HCS2 524 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 LRIT1Q9P2V4 623 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 SEPT3Q9UH03 358 aa15.75■□□□□ 0.11
CALD1-208ENST00000435928 PRSS38A1L453 326 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 AGRPO00253 132 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 PDE2AO00408 941 aaPredicted RBP15.74■□□□□ 0.11
CALD1-208ENST00000435928 NVLO15381 856 aaKnown RBP15.74■□□□□ 0.11
CALD1-208ENST00000435928 TEX33O43247 280 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 NUDT21O43809 227 aaKnown RBP15.74■□□□□ 0.11
CALD1-208ENST00000435928 MYCLP1P12525 358 aaPredicted RBP15.74■□□□□ 0.11
CALD1-208ENST00000435928 GM2AP17900 193 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 ITIH1P19827 911 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 RENBPP51606 427 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 ZNF235Q14590 738 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 TGIF1Q15583 401 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 MAP9Q49MG5 647 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 PHF19Q5T6S3 580 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 TMCO4Q5TGY1 634 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 PNCKQ6P2M8 343 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 CLEC17AQ6ZS10 378 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 APTXQ7Z2E3 356 aaKnown RBP15.74■□□□□ 0.11
CALD1-208ENST00000435928 SFTPA2Q8IWL1 248 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 ARFGAP1Q8N6T3 406 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 CCL4L1Q8NHW4 92 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 NUS1Q96E22 293 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 SGF29Q96ES7 293 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 PSKH2Q96QS6 385 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 CMKLR1Q99788 373 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 SYT11Q9BT88 431 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 LGR4Q9BXB1 951 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 SEPT10Q9P0V9 454 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 B4GALT6Q9UBX8 382 aa15.74■□□□□ 0.11
CALD1-208ENST00000435928 ZFC3H1O60293 1989 aaKnown RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 PRAMEF33A0A0G2JMD5 474 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 LRRC10BA6NIK2 292 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 EFSO43281 561 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 SLC28A2O43868 658 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 PRAMEF10O60809 474 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 MIPP30301 263 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 ZNF135P52742 658 aaPredicted RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 ZFP36L1Q07352 338 aaKnown RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 LBRQ14739 615 aaKnown RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 CYP4V2Q6ZWL3 525 aaPredicted RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 USP53Q70EK8 1073 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 PSTKQ8IV42 348 aaKnown RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 PELI3Q8N2H9 469 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 LZTR1Q8N653 840 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 FNIP1Q8TF40 1166 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 PDCD6IPQ8WUM4 868 aaKnown RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 ZNF599Q96NL3 588 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 SUDS3Q9H7L9 328 aaPredicted RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 ZWILCHQ9H900 591 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 CARS2Q9HA77 564 aaKnown RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 PHPT1Q9NRX4 125 aaPredicted RBP15.73■□□□□ 0.11
CALD1-208ENST00000435928 MYO6Q9UM54 1294 aa15.73■□□□□ 0.11
CALD1-208ENST00000435928 TMEM191CA6NGB0 347 aa15.72■□□□□ 0.11
CALD1-208ENST00000435928 SOCS5O75159 536 aa15.72■□□□□ 0.11
CALD1-208ENST00000435928 CPP00450 1065 aa15.72■□□□□ 0.11
CALD1-208ENST00000435928 KRT10P13645 584 aa15.72■□□□□ 0.11
CALD1-208ENST00000435928 CCNB1P14635 433 aa15.72■□□□□ 0.11
CALD1-208ENST00000435928 NFKBIAP25963 317 aa15.72■□□□□ 0.11
CALD1-208ENST00000435928 HCAR3P49019 387 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms