RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ACOX1Q15067 660 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 PRKD1Q15139 912 aaPredicted RBP16.3■□□□□ 0.2
SMPD4-207ENST00000435455 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 CNGA3Q16281 694 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 CCDC181Q5TID7 509 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 MACC1Q6ZN28 852 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 PEX26Q7Z412 305 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 NT5DC3Q86UY8 548 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 RNF10Q8N5U6 811 aaKnown RBP16.3■□□□□ 0.2
SMPD4-207ENST00000435455 EID2Q8N6I1 236 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 UBL4BQ8N7F7 174 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 CNTD1Q8N815 330 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 BTN2A2Q8WVV5 523 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 COQ10AQ96MF6 247 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 TDRD1Q9BXT4 1180 aaKnown RBP16.3■□□□□ 0.2
SMPD4-207ENST00000435455 SAE1Q9UBE0 346 aaPredicted RBP16.3■□□□□ 0.2
SMPD4-207ENST00000435455 CHKBQ9Y259 395 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
SMPD4-207ENST00000435455 NEMP2A6NFY4 417 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 NPIPB15A6NHN6 443 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-207ENST00000435455 APOC4-APOC2K7ER74 178 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 LDOC1O95751 146 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-207ENST00000435455 APOC2P02655 101 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 PCCBP05166 539 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 ATXN1LP0C7T5 689 aaKnown RBP16.29■□□□□ 0.2
SMPD4-207ENST00000435455 HTR1BP28222 390 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 CD86P42081 329 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 ADCY2Q08462 1091 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 TEX44Q53QW1 395 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 HS1BP3Q53T59 392 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 ZNF542PQ5EBM4 170 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 TPRG1LQ5T0D9 272 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 KDM7AQ6ZMT4 941 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 SLC25A45Q8N413 288 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 ATL2Q8NHH9 583 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 CNDP2Q96KP4 475 aaKnown RBP16.29■□□□□ 0.2
SMPD4-207ENST00000435455 AGAP3Q96P47 875 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 APOOQ9BUR5 198 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 HEMGNQ9BXL5 484 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 OSBPL8Q9BZF1 889 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 TSGA10Q9BZW7 698 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 SLC25A51Q9H1U9 297 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 PCDH9Q9HC56 1237 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 TRIM10Q9UDY6 481 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 CSNK1G3Q9Y6M4 447 aa16.29■□□□□ 0.2
SMPD4-207ENST00000435455 A0A0J9YYE9 177 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 CAPN8A6NHC0 703 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ENC1O14682 589 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 KRT86O43790 486 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 NRDCO43847 1150 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 PRLP01236 227 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 TRBC1P01850 177 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 MMP2P08253 660 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ALPPL2P10696 532 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ZNF30P17039 623 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 JUNDP17535 347 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 CTPS1P17812 591 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 GM2AP17900 193 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 LHCGRP22888 699 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 HNF1BP35680 557 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 SKOR1P84550 965 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 EIF2B5Q13144 721 aaKnown RBP16.28■□□□□ 0.2
SMPD4-207ENST00000435455 XRCC4Q13426 336 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 IHHQ14623 411 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 SLC14A2Q15849 920 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ESRP1Q6NXG1 681 aaKnown RBP16.28■□□□□ 0.2
SMPD4-207ENST00000435455 RAB44Q7Z6P3 723 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ZC3H18Q86VM9 953 aaKnown RBP16.28■□□□□ 0.2
SMPD4-207ENST00000435455 CBARPQ8N350 705 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-207ENST00000435455 OR4C6Q8NH72 309 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ADAMTS14Q8WXS8 1223 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ALG3Q92685 438 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 NUS1Q96E22 293 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 IMP4Q96G21 291 aaKnown RBP16.28■□□□□ 0.2
SMPD4-207ENST00000435455 TBATAQ96M53 351 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 QKIQ96PU8 341 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMPD4-207ENST00000435455 ADGRE3Q9BY15 652 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 CEP41Q9BYV8 373 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 SLC13A1Q9BZW2 595 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 GLOD4Q9HC38 313 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 UCKL1Q9NWZ5 548 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 WASF3Q9UPY6 502 aa16.28■□□□□ 0.2
SMPD4-207ENST00000435455 A0A0U1RQJ8 604 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 CACNB4O00305 520 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-207ENST00000435455 SCAMP1O15126 338 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 AQP9O43315 295 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 HOXC4P09017 264 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-207ENST00000435455 ALPIP09923 528 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 PTPN3P26045 913 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 TRIM23P36406 574 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 BLKP51451 505 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 KIAA1024LP59773 190 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 ZNF211Q13398 564 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-207ENST00000435455 NFATC4Q14934 902 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 DENND2CQ68D51 928 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 CRTC1Q6UUV9 634 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 B4GALNT4Q76KP1 1039 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 TSPAN33Q86UF1 283 aa16.27■□□□□ 0.2
SMPD4-207ENST00000435455 SLCO6A1Q86UG4 719 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms