RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 NUDT22Q9BRQ3 303 aa11.64□□□□□ -0.55
CHRNA1-207ENST00000435083 LGR4Q9BXB1 951 aa11.64□□□□□ -0.55
CHRNA1-207ENST00000435083 B3GNT4Q9C0J1 378 aa11.64□□□□□ -0.55
CHRNA1-207ENST00000435083 ADNPQ9H2P0 1102 aa11.64□□□□□ -0.55
CHRNA1-207ENST00000435083 ATP13A3Q9H7F0 1226 aa11.64□□□□□ -0.55
CHRNA1-207ENST00000435083 SPATS2LQ9NUQ6 558 aaKnown RBP11.64□□□□□ -0.55
CHRNA1-207ENST00000435083 ZFC3H1O60293 1989 aaKnown RBP11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 PRSS38A1L453 326 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 CFAP69A5D8W1 941 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 WASH4PA8MWX3 477 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 PDE2AO00408 941 aaPredicted RBP11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 HOXC4P09017 264 aaPredicted RBP11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 SERPINA4P29622 427 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 RGRP47804 291 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 RALGDSQ12967 914 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 BECN1Q14457 450 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 ACOX1Q15067 660 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 SKIDA1Q1XH10 827 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 ZNF564Q8TBZ8 553 aaPredicted RBP11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 ZDHHC1Q8WTX9 485 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 CELF6Q96J87 481 aaKnown RBP11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 CCDC74BQ96LY2 380 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 WDR26Q9H7D7 661 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 CARS2Q9HA77 564 aaKnown RBP11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 PDFQ9HBH1 243 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 ADAM22Q9P0K1 906 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 ANKMY1Q9P2S6 941 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 FZD10Q9ULW2 581 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 SDK2Q58EX2 2172 aa11.63□□□□□ -0.55
CHRNA1-207ENST00000435083 IGHV5-10-1A0A0J9YXX1 117 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 HGSO14964 777 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ZW10O43264 779 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 CCP110O43303 1012 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PRAMEF11O60813 436 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 FGF1P05230 155 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 FGF3P11487 239 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 CCNB1P14635 433 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 TRIM23P36406 574 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 STAT1P42224 750 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 NSFP46459 744 aaKnown RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 POLE2P56282 527 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 BCL2L1Q07817 233 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PTP4A2Q12974 167 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 KCNAB2Q13303 367 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PNCKQ6P2M8 343 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 TRIM72Q6ZMU5 477 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PELI3Q8N2H9 469 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 TSEN2Q8NCE0 465 aaKnown RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PMEPA1Q969W9 287 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ARHGEF17Q96PE2 2063 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 FGF10O15520 208 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PALMO75781 387 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ECEL1O95672 775 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 LIFP15018 202 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 GM2AP17900 193 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 CD1CP29017 333 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 UGT1A3P35503 534 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 CSNK1DP48730 415 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PAPOLAP51003 745 aaKnown RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ARSDP51689 593 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 TPI1P60174 286 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 POLR2FP61218 127 aaKnown RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 POLR2LP62875 67 aaKnown RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ILF3Q12906 894 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 UBAP2LQ14157 1087 aaKnown RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 AFMIDQ63HM1 303 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 DPPA4Q7L190 304 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ZNF438Q7Z4V0 828 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 NRROSQ86YC3 692 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 CACNA2D3Q8IZS8 1091 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 GPBAR1Q8TDU6 330 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ART4Q93070 314 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PCDHB18PQ96TA0 734 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 CINPQ9BW66 212 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 GSDMCQ9BYG8 508 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 SLC39A8Q9C0K1 460 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 EPN3Q9H201 632 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 LRRC19Q9H756 370 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 NLRC4Q9NPP4 1024 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 SAMSN1Q9NSI8 373 aaKnown RBP11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 TAB2Q9NYJ8 693 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 TAAR2Q9P1P5 351 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 PCDHGA3Q9Y5H0 932 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 B3GALT1Q9Y5Z6 326 aa11.62□□□□□ -0.55
CHRNA1-207ENST00000435083 ANKRD62A6NC57 917 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 ARHGAP42A6NI28 874 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 SIGLEC16A6NMB1 481 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 CALB1P05937 261 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 MYCLP1P12525 358 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 UNGP13051 313 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 MPSTP25325 297 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 AK4P27144 223 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 CSTF2P33240 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 SOX5P35711 763 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 CCR10P46092 362 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 GNPDA1P46926 289 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 PPM1FP49593 454 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 NDST2P52849 883 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 LIMK2P53671 638 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms