RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 CCNG1P51959 295 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 DNAJB13P59910 316 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 KDSRQ06136 332 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 PPM1LQ5SGD2 360 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 C6orf163Q5TEZ5 329 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 PIWIL4Q7Z3Z4 852 aaKnown RBP11.99□□□□□ -0.49
CTCFL-209ENST00000433949 GPR65Q8IYL9 337 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 RBM15BQ8NDT2 890 aaKnown RBP11.99□□□□□ -0.49
CTCFL-209ENST00000433949 GPR78Q96P69 363 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 OMDQ99983 421 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 MGME1Q9BQP7 344 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 PRO3102Q9H379 93 aa11.99□□□□□ -0.49
CTCFL-209ENST00000433949 ZNF334Q9HCZ1 680 aaPredicted RBP11.99□□□□□ -0.49
CTCFL-209ENST00000433949 A0A1B0GVM2 712 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 TCAF2A6NFQ2 919 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 MATN2O00339 956 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 LDB2O43679 373 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 NPHS1O60500 1241 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 HOXD9P28356 352 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 SLC6A4P31645 630 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 GLRBP48167 497 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 GTF2A1P52655 376 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 SMAD3P84022 425 aaKnown RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 SEL1L3Q68CR1 1132 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 IL31Q6EBC2 164 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 MRNIPQ6NTE8 343 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 CNSTQ6PJW8 725 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 ATG14Q6ZNE5 492 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 EP400NLQ6ZTU2 488 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 CCDC149Q6ZUS6 474 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 MFSD6LQ8IWD5 586 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 GPR150Q8NGU9 434 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 OR6P1Q8NGX9 317 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 NXNL1Q96CM4 212 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 CYP2S1Q96SQ9 504 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 TRPC7Q9HCX4 862 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 MRGBPQ9NV56 204 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■■■□□ 17.1
CTCFL-209ENST00000433949 ZFP37Q9Y6Q3 630 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 C2orf78A6NCI8 922 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 F8W8V4 182 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 NRG2O14511 850 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 SLC22A2O15244 555 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 COCHO43405 550 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 KDELR3O43731 214 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 TM7SF2O76062 418 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 NDST3O95803 873 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 LTA4HP09960 611 aaKnown RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 ATP5F1P24539 256 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 COPAP53621 1224 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 NAGLUP54802 743 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 OXCT1P55809 520 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 MXRA7P84157 204 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 NSUN2Q08J23 767 aaKnown RBP eCLIP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 UBAP2LQ14157 1087 aaKnown RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 ADGRF1Q5T601 910 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 FAM45BPQ6NSW5 357 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 DENND1CQ8IV53 801 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 FAM45AQ8TCE6 357 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 HDAC10Q969S8 669 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 CINPQ9BW66 212 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 GPAMQ9HCL2 828 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 TCF7L2Q9NQB0 619 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 UBA2Q9UBT2 640 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-209ENST00000433949 C15orf41Q9Y2V0 281 aa11.98□□□□□ -0.49
CTCFL-209ENST00000433949 OBSL1O75147 1896 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 DENND4CQ5VZ89 1909 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 SCAMP3O14828 347 aaKnown RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 DLX3O60479 287 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 STC2O76061 302 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 PIGNO95427 931 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 CRTAMO95727 393 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 LATS1O95835 1130 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 GLP2RO95838 553 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 TPBGLP0DKB5 382 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 ADSLP30566 484 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 NTHL1P78549 312 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 USP4Q13107 963 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 ZNF177Q13360 481 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 IHHQ14623 411 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 ACAP2Q15057 778 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 TRMT5Q32P41 509 aaKnown RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 ARL13AQ5H913 290 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 RFWD3Q6PCD5 774 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 TMC5Q6UXY8 1006 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 ZNF783Q6ZMS7 281 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 PTAR1Q7Z6K3 402 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 SLC22A9Q8IVM8 553 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 SCUBE1Q8IWY4 988 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 CFAP52Q8N1V2 620 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 HEXDCQ8WVB3 486 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 CNDP1Q96KN2 507 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 UBXN10Q96LJ8 280 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 CDH22Q9UJ99 828 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 MAFFQ9ULX9 164 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 VWA7Q9Y334 891 aa11.97□□□□□ -0.49
CTCFL-209ENST00000433949 PRRC2BQ5JSZ5 2229 aaKnown RBP11.97□□□□□ -0.49
CTCFL-209ENST00000433949 A0A0D9SEW6 157 aa11.96□□□□□ -0.49
CTCFL-209ENST00000433949 A0A1W2PRU2 124 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms