RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 AGPAT1Q99943 283 aa14.94□□□□□ -0.02
PRKDC-203ENST00000432581 CINPQ9BW66 212 aaPredicted RBP14.94□□□□□ -0.02
PRKDC-203ENST00000432581 TMEM168Q9H0V1 697 aa14.94□□□□□ -0.02
PRKDC-203ENST00000432581 MRPL40Q9NQ50 206 aaKnown RBP14.94□□□□□ -0.02
PRKDC-203ENST00000432581 AKAP7Q9P0M2 348 aaPredicted RBP14.94□□□□□ -0.02
PRKDC-203ENST00000432581 AP4E1Q9UPM8 1137 aa14.94□□□□□ -0.02
PRKDC-203ENST00000432581 HECTD1Q9ULT8 2610 aa14.94□□□□□ -0.02
PRKDC-203ENST00000432581 TLN1Q9Y490 2541 aaKnown RBP14.93□□□□□ -0.02
PRKDC-203ENST00000432581 PRAMEF33A0A0G2JMD5 474 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 EEF2KO00418 725 aaKnown RBP14.93□□□□□ -0.02
PRKDC-203ENST00000432581 ZW10O43264 779 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 DAPK3O43293 454 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 PRAMEF10O60809 474 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 KRT10P13645 584 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 ITIH1P19827 911 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 RGRP47804 291 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 CSRP3P50461 194 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 CLPPQ16740 277 aaPredicted RBP14.93□□□□□ -0.02
PRKDC-203ENST00000432581 MAP9Q49MG5 647 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 PHF19Q5T6S3 580 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 TMEM164Q5U3C3 297 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 PPP1R2P3Q6NXS1 205 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 ANKRD20A12PQ8NF67 263 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 EXTL1Q92935 676 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 USP7Q93009 1102 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 SLC39A8Q9C0K1 460 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 SP110Q9HB58 689 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 CYP4F12Q9HCS2 524 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 STARD5Q9NSY2 213 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 KCTD5Q9NXV2 234 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 CHMP5Q9NZZ3 219 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
PRKDC-203ENST00000432581 PRSS38A1L453 326 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 PYCARD-AS1I3L0S3 204 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 TRAFD1O14545 582 aaPredicted RBP14.92□□□□□ -0.02
PRKDC-203ENST00000432581 CPNE6O95741 557 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 CCDC172P0C7W6 258 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 ETV5P41161 510 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 RENBPP51606 427 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 COPB1P53618 953 aaKnown RBP14.92□□□□□ -0.02
PRKDC-203ENST00000432581 MAPK10P53779 464 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 AP1S1P61966 158 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 SRSF6Q13247 344 aaKnown RBP14.92□□□□□ -0.02
PRKDC-203ENST00000432581 ACAD10Q6JQN1 1059 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 PNCKQ6P2M8 343 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 RFX8Q6ZV50 586 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 PIM3Q86V86 326 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 DTX1Q86Y01 620 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 MCOLN2Q8IZK6 566 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 SEMA3CQ99985 751 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 LGR4Q9BXB1 951 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 DHX35Q9H5Z1 703 aaKnown RBP14.92□□□□□ -0.02
PRKDC-203ENST00000432581 GPATCH2LQ9NWQ4 482 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 FOXJ2Q9P0K8 574 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 MOSPD1Q9UJG1 213 aa14.92□□□□□ -0.02
PRKDC-203ENST00000432581 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 A0A1W2PQ67 120 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 LGALS16A8MUM7 142 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 C9orf172C9J069 976 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 DFFAO00273 331 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 HGSO14964 777 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 ARHGAP6O43182 974 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 MYCLP1P12525 358 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 CCNB1P14635 433 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 GM2AP17900 193 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 NFKBIAP25963 317 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 ZNF135P52742 658 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 B4GALNT1Q00973 533 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 OGDHQ02218 1023 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 IL10RBQ08334 325 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 ILF3Q12906 894 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 ACOX1Q15067 660 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 ERMARDQ5T6L9 678 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 TMPRSS9Q7Z410 1059 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 VASH2Q86V25 355 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 C17orf82Q86X59 251 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 ZFAND4Q86XD8 727 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 SFTPA2Q8IWL1 248 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 ARHGAP12Q8IWW6 846 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 CCL4L1Q8NHW4 92 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 GPBAR1Q8TDU6 330 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 PSKH2Q96QS6 385 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 GSDMCQ9BYG8 508 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 SEMA6CQ9H3T2 930 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 CARS2Q9HA77 564 aaKnown RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 PHPT1Q9NRX4 125 aaPredicted RBP14.91□□□□□ -0.02
PRKDC-203ENST00000432581 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 FANCLQ9NW38 375 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 SEPT3Q9UH03 358 aa14.91□□□□□ -0.02
PRKDC-203ENST00000432581 RHPN2P1A8MT19 583 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 AGRPO00253 132 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 TEX33O43247 280 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 FERP16591 822 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 ERCC2P18074 760 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 PSMA2P25787 234 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 SCNN1BP51168 640 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 MAMLD1Q13495 774 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms