RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FBXO46Q6PJ61 603 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF793Q6ZN11 406 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 DENND5BQ6ZUT9 1274 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 GSTA5Q7RTV2 222 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 PATL1Q86TB9 770 aaKnown RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 FAM217AQ8IXS0 508 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 PARP16Q8N5Y8 322 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZBTB2Q8N680 514 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 POC5Q8NA72 575 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 HJURPQ8NCD3 748 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CEP76Q8TAP6 659 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 GPT2Q8TD30 523 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 PIGOQ8TEQ8 1089 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 IGSF8Q969P0 613 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CEP295NLQ96MC4 621 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SIN3AQ96ST3 1273 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 TMEM47Q9BQJ4 181 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 TEX12Q9BXU0 123 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SPRY4Q9C004 299 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 KCNN2Q9H2S1 579 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SMARCAD1Q9H4L7 1026 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 TASP1Q9H6P5 420 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 RRP7BPQ9NSQ0 103 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 GIMAP4Q9NUV9 329 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 OGFRQ9NZT2 677 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CHORDC1Q9UHD1 332 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 EXO1Q9UQ84 846 aaKnown RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 STON1Q9Y6Q2 735 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SMARCA2P51531 1590 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CKAP5Q14008 2032 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF644Q9H582 1327 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 MRC2Q9UBG0 1479 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 SYNDIG1LA6NDD5 238 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 STMND1H3BQB6 276 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 LDB2O43679 373 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 MITFO75030 526 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 FSHBP01225 129 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 SRPRAP08240 638 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 CLTBP09497 229 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 IL7RP16871 459 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 TRIM21P19474 475 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 MAOAP21397 527 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 MYF6P23409 242 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 GCH1P30793 250 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 RFC1P35251 1148 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 AVPR1AP37288 418 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 NRIP1P48552 1158 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 CXCL9Q07325 125 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 SPOCK1Q08629 439 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 ST3GAL1Q11201 340 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 CAPSQ13938 189 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 RUNX2Q13950 521 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 NTRK2Q16620 822 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 RARS2Q5T160 578 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 KRT79Q5XKE5 535 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 HEPHL1Q6MZM0 1159 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 TMCO3Q6UWJ1 677 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 TAGAPQ8N103 731 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 C17orf53Q8N3J3 647 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZCCHC9Q8N567 271 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 CCDC191Q8NCU4 936 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 MPLKIPQ8TAP9 179 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 PRPF31Q8WWY3 499 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 INPP5DQ92835 1189 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 ELMOD3Q96FG2 381 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 SORCS2Q96PQ0 1159 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 MAK16Q9BXY0 300 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 MRPL1Q9BYD6 325 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 LHPPQ9H008 270 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 PLK3Q9H4B4 646 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 RIOX1Q9H6W3 641 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 CLK4Q9HAZ1 481 aaKnown RBP3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 BPIFA1Q9NP55 256 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 CYSLTR2Q9NS75 346 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 NENFQ9UMX5 172 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF711Q9Y462 761 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 ARHGEF11O15085 1522 aa3.23□□□□□ -1.89
HMGB1P27-201ENST00000431429 BAZ1AQ9NRL2 1556 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 LOC102723996A0A087X1L8 192 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 A0A1B0GVM2 712 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 TYW5A2RUC4 315 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 TMEM202A6NGA9 273 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 H7C0S8 307 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 CHL1O00533 1208 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ADAM10O14672 748 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 TCERG1O14776 1098 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ADAMDEC1O15204 470 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 AKAP8O43823 692 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 HNRNPCL1O60812 293 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ATP2C2O75185 946 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 TPPPO94811 219 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 NDUFB4O95168 129 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 NUDT3O95989 172 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 KRT10P13645 584 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ARHGAP25P42331 645 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 RAD23BP54727 409 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 CDH12P55289 794 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 TAS2R40P59535 323 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 MRPS5P82675 430 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 MRPS34P82930 218 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms